Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC9A3P48764 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC9A3P48764 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC9A3P48764 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 AC103834.1-201ENST00000520383 144 ntBASIC20.35■□□□□ 0.85
SLC9A3P48764 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SLC9A3P48764 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC9A3P48764 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SLC9A3P48764 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC9A3P48764 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC9A3P48764 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC9A3P48764 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
SLC9A3P48764 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC9A3P48764 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.34■□□□□ 0.85
SLC9A3P48764 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC9A3P48764 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC9A3P48764 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC9A3P48764 KRT8P33-201ENST00000508125 1423 ntBASIC20.34■□□□□ 0.85
SLC9A3P48764 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC9A3P48764 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC9A3P48764 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC9A3P48764 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC9A3P48764 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
SLC9A3P48764 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC9A3P48764 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC9A3P48764 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC9A3P48764 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC9A3P48764 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC9A3P48764 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC9A3P48764 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC9A3P48764 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC9A3P48764 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC9A3P48764 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC9A3P48764 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SLC9A3P48764 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC9A3P48764 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC9A3P48764 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC9A3P48764 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC9A3P48764 AC079630.1-202ENST00000618127 1840 ntBASIC20.32■□□□□ 0.84
SLC9A3P48764 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC9A3P48764 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC9A3P48764 AC103724.3-201ENST00000564481 992 ntBASIC20.32■□□□□ 0.84
SLC9A3P48764 SNX5-217ENST00000606557 1087 ntBASIC20.32■□□□□ 0.84
SLC9A3P48764 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC9A3P48764 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC9A3P48764 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SLC9A3P48764 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC9A3P48764 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC9A3P48764 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC9A3P48764 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
SLC9A3P48764 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC9A3P48764 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC9A3P48764 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC9A3P48764 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC9A3P48764 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC9A3P48764 AC137630.3-201ENST00000607245 391 ntBASIC20.31■□□□□ 0.84
SLC9A3P48764 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC9A3P48764 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC9A3P48764 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC9A3P48764 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC9A3P48764 GUSBP5-202ENST00000510805 1989 ntBASIC20.3■□□□□ 0.84
SLC9A3P48764 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC9A3P48764 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC9A3P48764 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC9A3P48764 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC9A3P48764 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC9A3P48764 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC9A3P48764 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC9A3P48764 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC9A3P48764 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC9A3P48764 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC9A3P48764 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC9A3P48764 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC9A3P48764 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC9A3P48764 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC9A3P48764 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC9A3P48764 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC9A3P48764 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms