Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SLC1A3P43003 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 DUSP8P3-201ENST00000399571 1760 ntBASIC20.48■□□□□ 0.87
SLC1A3P43003 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC1A3P43003 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC1A3P43003 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SLC1A3P43003 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A3P43003 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A3P43003 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A3P43003 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SLC1A3P43003 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC1A3P43003 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A3P43003 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A3P43003 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A3P43003 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A3P43003 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A3P43003 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC1A3P43003 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC1A3P43003 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC1A3P43003 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC1A3P43003 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SLC1A3P43003 AC079630.1-202ENST00000618127 1840 ntBASIC20.46■□□□□ 0.87
SLC1A3P43003 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A3P43003 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A3P43003 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SLC1A3P43003 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A3P43003 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A3P43003 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A3P43003 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
SLC1A3P43003 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A3P43003 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A3P43003 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A3P43003 UNC93B8-201ENST00000511903 705 ntBASIC20.45■□□□□ 0.86
SLC1A3P43003 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A3P43003 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A3P43003 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A3P43003 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A3P43003 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A3P43003 C1orf229-201ENST00000623686 2258 ntBASIC20.44■□□□□ 0.86
SLC1A3P43003 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A3P43003 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A3P43003 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A3P43003 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A3P43003 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A3P43003 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC1A3P43003 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A3P43003 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A3P43003 LINC00565-201ENST00000562710 2331 ntBASIC20.44■□□□□ 0.86
SLC1A3P43003 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A3P43003 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A3P43003 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A3P43003 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SLC1A3P43003 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC1A3P43003 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A3P43003 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A3P43003 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
SLC1A3P43003 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A3P43003 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A3P43003 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC1A3P43003 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC1A3P43003 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A3P43003 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A3P43003 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SLC1A3P43003 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SLC1A3P43003 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A3P43003 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A3P43003 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC1A3P43003 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A3P43003 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC1A3P43003 GUSBP5-201ENST00000418136 578 ntBASIC20.41■□□□□ 0.86
SLC1A3P43003 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC1A3P43003 MIR6724-1-201ENST00000616420 92 ntBASIC20.41■□□□□ 0.86
SLC1A3P43003 MIR6724-2-201ENST00000616483 92 ntBASIC20.41■□□□□ 0.86
SLC1A3P43003 MIR6724-4-201ENST00000617390 92 ntBASIC20.41■□□□□ 0.86
SLC1A3P43003 MIR6724-3-201ENST00000622482 92 ntBASIC20.41■□□□□ 0.86
SLC1A3P43003 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A3P43003 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A3P43003 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC1A3P43003 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A3P43003 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SLC1A3P43003 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A3P43003 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms