Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.4■□□□□ 0.86
RFC3P40938 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.4■□□□□ 0.86
RFC3P40938 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFC3P40938 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RFC3P40938 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.4■□□□□ 0.86
RFC3P40938 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.4■□□□□ 0.86
RFC3P40938 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.4■□□□□ 0.86
RFC3P40938 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.39■□□□□ 0.86
RFC3P40938 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
RFC3P40938 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFC3P40938 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFC3P40938 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC3P40938 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RFC3P40938 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.39■□□□□ 0.85
RFC3P40938 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC3P40938 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC3P40938 ABCB10P4-201ENST00000566803 2184 ntBASIC20.39■□□□□ 0.85
RFC3P40938 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC3P40938 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.39■□□□□ 0.85
RFC3P40938 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC3P40938 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC3P40938 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RFC3P40938 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC3P40938 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC3P40938 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFC3P40938 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC3P40938 AC233992.3-201ENST00000607491 485 ntBASIC20.38■□□□□ 0.85
RFC3P40938 LINC00543-201ENST00000567234 1845 ntBASIC20.38■□□□□ 0.85
RFC3P40938 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC3P40938 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.38■□□□□ 0.85
RFC3P40938 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC3P40938 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC3P40938 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC3P40938 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC3P40938 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFC3P40938 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC3P40938 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.37■□□□□ 0.85
RFC3P40938 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.37■□□□□ 0.85
RFC3P40938 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFC3P40938 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.37■□□□□ 0.85
RFC3P40938 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
RFC3P40938 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC3P40938 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC3P40938 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFC3P40938 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.36■□□□□ 0.85
RFC3P40938 AC026271.2-201ENST00000428091 497 ntBASIC20.36■□□□□ 0.85
RFC3P40938 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RFC3P40938 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFC3P40938 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFC3P40938 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.36■□□□□ 0.85
RFC3P40938 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.35■□□□□ 0.85
RFC3P40938 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFC3P40938 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFC3P40938 BX842568.3-201ENST00000418104 571 ntBASIC20.35■□□□□ 0.85
RFC3P40938 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFC3P40938 SLC47A1P1-202ENST00000449666 945 ntBASIC20.35■□□□□ 0.85
RFC3P40938 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.35■□□□□ 0.85
RFC3P40938 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFC3P40938 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFC3P40938 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFC3P40938 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFC3P40938 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.35■□□□□ 0.85
RFC3P40938 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.34■□□□□ 0.85
RFC3P40938 AC126544.1-201ENST00000580842 1059 ntBASIC20.34■□□□□ 0.85
RFC3P40938 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RFC3P40938 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC3P40938 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.33■□□□□ 0.85
RFC3P40938 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC3P40938 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC3P40938 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFC3P40938 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFC3P40938 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RFC3P40938 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.33■□□□□ 0.84
RFC3P40938 AC133637.1-201ENST00000624115 1537 ntBASIC20.32■□□□□ 0.84
RFC3P40938 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFC3P40938 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC3P40938 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RFC3P40938 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC3P40938 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFC3P40938 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC3P40938 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC3P40938 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC3P40938 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC3P40938 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC3P40938 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RFC3P40938 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFC3P40938 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFC3P40938 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC3P40938 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC3P40938 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC3P40938 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC3P40938 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms