Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
CEACAM3P40198 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.14■□□□□ 0.5
CEACAM3P40198 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CEACAM3P40198 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.14■□□□□ 0.49
CEACAM3P40198 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CEACAM3P40198 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CEACAM3P40198 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.14■□□□□ 0.49
CEACAM3P40198 DUX4L19-201ENST00000557448 1267 ntBASIC18.14■□□□□ 0.49
CEACAM3P40198 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.14■□□□□ 0.49
CEACAM3P40198 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CEACAM3P40198 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CEACAM3P40198 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.14■□□□□ 0.49
CEACAM3P40198 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CEACAM3P40198 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CEACAM3P40198 AC079630.1-202ENST00000618127 1840 ntBASIC18.14■□□□□ 0.49
CEACAM3P40198 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.13■□□□□ 0.49
CEACAM3P40198 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.13■□□□□ 0.49
CEACAM3P40198 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.13■□□□□ 0.49
CEACAM3P40198 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.13■□□□□ 0.49
CEACAM3P40198 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 AL136116.3-201ENST00000402907 1138 ntBASIC18.13■□□□□ 0.49
CEACAM3P40198 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.13■□□□□ 0.49
CEACAM3P40198 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.13■□□□□ 0.49
CEACAM3P40198 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CEACAM3P40198 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.12■□□□□ 0.49
CEACAM3P40198 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CEACAM3P40198 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CEACAM3P40198 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CEACAM3P40198 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CEACAM3P40198 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.12■□□□□ 0.49
CEACAM3P40198 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CEACAM3P40198 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.12■□□□□ 0.49
CEACAM3P40198 AC009086.3-201ENST00000623486 1008 ntBASIC18.12■□□□□ 0.49
CEACAM3P40198 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.12■□□□□ 0.49
CEACAM3P40198 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CEACAM3P40198 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CEACAM3P40198 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CEACAM3P40198 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.11■□□□□ 0.49
CEACAM3P40198 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CEACAM3P40198 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CEACAM3P40198 DUX4L4-201ENST00000566884 1269 ntBASIC18.11■□□□□ 0.49
CEACAM3P40198 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CEACAM3P40198 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CEACAM3P40198 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.11■□□□□ 0.49
CEACAM3P40198 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.11■□□□□ 0.49
CEACAM3P40198 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CEACAM3P40198 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CEACAM3P40198 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CEACAM3P40198 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.1■□□□□ 0.49
CEACAM3P40198 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CEACAM3P40198 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.1■□□□□ 0.49
CEACAM3P40198 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CEACAM3P40198 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.1■□□□□ 0.49
CEACAM3P40198 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.1■□□□□ 0.49
CEACAM3P40198 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CEACAM3P40198 MIR4466-201ENST00000606121 54 ntBASIC18.1■□□□□ 0.49
CEACAM3P40198 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CEACAM3P40198 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CEACAM3P40198 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CEACAM3P40198 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CEACAM3P40198 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CEACAM3P40198 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CEACAM3P40198 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.09■□□□□ 0.49
CEACAM3P40198 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.09■□□□□ 0.49
CEACAM3P40198 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CEACAM3P40198 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.09■□□□□ 0.49
CEACAM3P40198 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CEACAM3P40198 AC099791.2-201ENST00000605725 427 ntBASIC18.09■□□□□ 0.49
CEACAM3P40198 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.09■□□□□ 0.49
CEACAM3P40198 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CEACAM3P40198 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.09■□□□□ 0.49
CEACAM3P40198 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.09■□□□□ 0.49
CEACAM3P40198 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CEACAM3P40198 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CEACAM3P40198 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CEACAM3P40198 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CEACAM3P40198 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CEACAM3P40198 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
CEACAM3P40198 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CEACAM3P40198 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CEACAM3P40198 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CEACAM3P40198 AL353803.4-201ENST00000565882 1934 ntBASIC18.08■□□□□ 0.48
CEACAM3P40198 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.07■□□□□ 0.48
CEACAM3P40198 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CEACAM3P40198 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.07■□□□□ 0.48
CEACAM3P40198 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.07■□□□□ 0.48
CEACAM3P40198 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.07■□□□□ 0.48
CEACAM3P40198 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CEACAM3P40198 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.07■□□□□ 0.48
CEACAM3P40198 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.07■□□□□ 0.48
CEACAM3P40198 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.07■□□□□ 0.48
CEACAM3P40198 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CEACAM3P40198 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms