Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CKS2P33552 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CKS2P33552 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.38■□□□□ 0.21
CKS2P33552 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS2P33552 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.38■□□□□ 0.21
CKS2P33552 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CKS2P33552 SLC25A24-204ENST00000569674 2357 ntBASIC16.38■□□□□ 0.21
CKS2P33552 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS2P33552 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.38■□□□□ 0.21
CKS2P33552 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS2P33552 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.38■□□□□ 0.21
CKS2P33552 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKS2P33552 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.38■□□□□ 0.21
CKS2P33552 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.38■□□□□ 0.21
CKS2P33552 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS2P33552 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS2P33552 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS2P33552 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.38■□□□□ 0.21
CKS2P33552 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS2P33552 C11orf96-202ENST00000528572 1834 ntBASIC16.38■□□□□ 0.21
CKS2P33552 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS2P33552 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.37■□□□□ 0.21
CKS2P33552 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.37■□□□□ 0.21
CKS2P33552 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS2P33552 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS2P33552 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.37■□□□□ 0.21
CKS2P33552 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS2P33552 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.37■□□□□ 0.21
CKS2P33552 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.37■□□□□ 0.21
CKS2P33552 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS2P33552 AC092053.2-201ENST00000640557 1818 ntBASIC16.37■□□□□ 0.21
CKS2P33552 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS2P33552 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.37■□□□□ 0.21
CKS2P33552 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CKS2P33552 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CKS2P33552 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.37■□□□□ 0.21
CKS2P33552 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CKS2P33552 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CKS2P33552 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CKS2P33552 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.36■□□□□ 0.21
CKS2P33552 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CKS2P33552 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CKS2P33552 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CKS2P33552 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CKS2P33552 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CKS2P33552 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CKS2P33552 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
CKS2P33552 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CKS2P33552 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CKS2P33552 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CKS2P33552 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.35■□□□□ 0.21
CKS2P33552 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CKS2P33552 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.35■□□□□ 0.21
CKS2P33552 AC138932.1-201ENST00000534164 6830 ntBASIC16.35■□□□□ 0.21
CKS2P33552 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CKS2P33552 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKS2P33552 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CKS2P33552 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.34■□□□□ 0.21
CKS2P33552 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CKS2P33552 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CKS2P33552 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.34■□□□□ 0.21
CKS2P33552 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CKS2P33552 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.34■□□□□ 0.21
CKS2P33552 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKS2P33552 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CKS2P33552 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.33■□□□□ 0.21
CKS2P33552 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CKS2P33552 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.33■□□□□ 0.2
CKS2P33552 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKS2P33552 RP9P-202ENST00000450133 1212 ntBASIC16.33■□□□□ 0.2
CKS2P33552 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKS2P33552 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.33■□□□□ 0.2
CKS2P33552 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKS2P33552 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.33■□□□□ 0.2
CKS2P33552 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CKS2P33552 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKS2P33552 FBXW4P1-201ENST00000426721 2239 ntBASIC16.33■□□□□ 0.2
CKS2P33552 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKS2P33552 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKS2P33552 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CKS2P33552 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKS2P33552 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKS2P33552 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms