Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MMP11P24347 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP11P24347 MIR4767-201ENST00000582827 78 ntBASIC21.17■□□□□ 0.98
MMP11P24347 AL136967.2-201ENST00000623968 743 ntBASIC21.17■□□□□ 0.98
MMP11P24347 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP11P24347 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.17■□□□□ 0.98
MMP11P24347 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP11P24347 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MMP11P24347 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.17■□□□□ 0.98
MMP11P24347 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP11P24347 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP11P24347 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP11P24347 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP11P24347 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP11P24347 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MMP11P24347 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.16■□□□□ 0.98
MMP11P24347 ZNRF2P3-201ENST00000424200 374 ntBASIC21.16■□□□□ 0.98
MMP11P24347 AF213884.3-201ENST00000563833 479 ntBASIC21.16■□□□□ 0.98
MMP11P24347 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP11P24347 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP11P24347 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
MMP11P24347 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP11P24347 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP11P24347 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP11P24347 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP11P24347 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
MMP11P24347 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP11P24347 MIR939-201ENST00000401314 82 ntBASIC21.15■□□□□ 0.98
MMP11P24347 AP001330.3-201ENST00000520123 633 ntBASIC21.15■□□□□ 0.98
MMP11P24347 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP11P24347 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.15■□□□□ 0.98
MMP11P24347 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP11P24347 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP11P24347 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP11P24347 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MMP11P24347 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MMP11P24347 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP11P24347 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MMP11P24347 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP11P24347 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP11P24347 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.14■□□□□ 0.97
MMP11P24347 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MMP11P24347 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP11P24347 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.14■□□□□ 0.97
MMP11P24347 AC009086.3-201ENST00000623486 1008 ntBASIC21.14■□□□□ 0.97
MMP11P24347 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP11P24347 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP11P24347 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP11P24347 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP11P24347 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP11P24347 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP11P24347 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
MMP11P24347 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.13■□□□□ 0.97
MMP11P24347 AC091305.1-201ENST00000479476 895 ntBASIC21.13■□□□□ 0.97
MMP11P24347 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.13■□□□□ 0.97
MMP11P24347 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.13■□□□□ 0.97
MMP11P24347 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MMP11P24347 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP11P24347 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
MMP11P24347 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP11P24347 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP11P24347 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP11P24347 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP11P24347 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP11P24347 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP11P24347 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP11P24347 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
MMP11P24347 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP11P24347 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP11P24347 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
MMP11P24347 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP11P24347 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.11■□□□□ 0.97
MMP11P24347 C9orf163-202ENST00000624034 2573 ntBASIC21.11■□□□□ 0.97
MMP11P24347 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP11P24347 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP11P24347 AC006455.2-201ENST00000429931 906 ntBASIC21.11■□□□□ 0.97
MMP11P24347 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
MMP11P24347 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MMP11P24347 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP11P24347 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
MMP11P24347 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP11P24347 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP11P24347 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP11P24347 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
MMP11P24347 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.1■□□□□ 0.97
MMP11P24347 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP11P24347 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.1■□□□□ 0.97
MMP11P24347 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MMP11P24347 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.1■□□□□ 0.97
MMP11P24347 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.1■□□□□ 0.97
MMP11P24347 AC136469.2-201ENST00000623944 1028 ntBASIC21.1■□□□□ 0.97
MMP11P24347 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.1■□□□□ 0.97
MMP11P24347 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP11P24347 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP11P24347 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP11P24347 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.1■□□□□ 0.97
MMP11P24347 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP11P24347 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP11P24347 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MMP11P24347 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms