Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.85■■□□□ 1.41
TNFAIP3P21580 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFAIP3P21580 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TNFAIP3P21580 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFAIP3P21580 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFAIP3P21580 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TNFAIP3P21580 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFAIP3P21580 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TNFAIP3P21580 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.84■■□□□ 1.41
TNFAIP3P21580 RARRES2P1-201ENST00000474487 481 ntBASIC23.84■■□□□ 1.41
TNFAIP3P21580 KRT125P-201ENST00000546827 989 ntBASIC23.84■■□□□ 1.41
TNFAIP3P21580 AC092028.1-203ENST00000608262 953 ntBASIC23.84■■□□□ 1.41
TNFAIP3P21580 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.84■■□□□ 1.41
TNFAIP3P21580 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TNFAIP3P21580 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFAIP3P21580 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.84■■□□□ 1.41
TNFAIP3P21580 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.84■■□□□ 1.41
TNFAIP3P21580 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TNFAIP3P21580 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNFAIP3P21580 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFAIP3P21580 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFAIP3P21580 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.83■■□□□ 1.41
TNFAIP3P21580 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFAIP3P21580 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.83■■□□□ 1.41
TNFAIP3P21580 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFAIP3P21580 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.83■■□□□ 1.41
TNFAIP3P21580 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.83■■□□□ 1.41
TNFAIP3P21580 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.83■■□□□ 1.41
TNFAIP3P21580 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TNFAIP3P21580 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TNFAIP3P21580 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
TNFAIP3P21580 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TNFAIP3P21580 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
TNFAIP3P21580 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFAIP3P21580 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFAIP3P21580 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 Z92544.1-202ENST00000571933 1220 ntBASIC23.82■■□□□ 1.4
TNFAIP3P21580 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TNFAIP3P21580 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFAIP3P21580 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFAIP3P21580 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFAIP3P21580 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.81■■□□□ 1.4
TNFAIP3P21580 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFAIP3P21580 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFAIP3P21580 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.81■■□□□ 1.4
TNFAIP3P21580 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNFAIP3P21580 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.81■■□□□ 1.4
TNFAIP3P21580 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.81■■□□□ 1.4
TNFAIP3P21580 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNFAIP3P21580 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.81■■□□□ 1.4
TNFAIP3P21580 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNFAIP3P21580 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFAIP3P21580 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TNFAIP3P21580 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFAIP3P21580 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFAIP3P21580 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TNFAIP3P21580 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFAIP3P21580 GUSBP5-202ENST00000510805 1989 ntBASIC23.8■■□□□ 1.4
TNFAIP3P21580 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFAIP3P21580 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFAIP3P21580 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TNFAIP3P21580 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TNFAIP3P21580 MIR4787-201ENST00000607364 84 ntBASIC23.8■■□□□ 1.4
TNFAIP3P21580 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFAIP3P21580 ESRRAP2-201ENST00000418437 1549 ntBASIC23.79■■□□□ 1.4
TNFAIP3P21580 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFAIP3P21580 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFAIP3P21580 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFAIP3P21580 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TNFAIP3P21580 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFAIP3P21580 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TNFAIP3P21580 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFAIP3P21580 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TNFAIP3P21580 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFAIP3P21580 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFAIP3P21580 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.78■■□□□ 1.4
TNFAIP3P21580 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TNFAIP3P21580 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.78■■□□□ 1.4
TNFAIP3P21580 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.78■■□□□ 1.4
TNFAIP3P21580 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFAIP3P21580 AC239859.2-201ENST00000444165 318 ntBASIC23.78■■□□□ 1.4
TNFAIP3P21580 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TNFAIP3P21580 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFAIP3P21580 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFAIP3P21580 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TNFAIP3P21580 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.77■■□□□ 1.4
TNFAIP3P21580 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TNFAIP3P21580 EP400NL-214ENST00000641289 2402 ntBASIC23.77■■□□□ 1.4
TNFAIP3P21580 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNFAIP3P21580 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNFAIP3P21580 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.77■■□□□ 1.4
TNFAIP3P21580 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNFAIP3P21580 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms