Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NF1P21359 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.39■□□□□ 0.53
NF1P21359 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.39■□□□□ 0.53
NF1P21359 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.39■□□□□ 0.53
NF1P21359 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NF1P21359 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NF1P21359 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NF1P21359 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NF1P21359 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NF1P21359 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.38■□□□□ 0.53
NF1P21359 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.38■□□□□ 0.53
NF1P21359 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.38■□□□□ 0.53
NF1P21359 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.38■□□□□ 0.53
NF1P21359 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NF1P21359 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NF1P21359 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NF1P21359 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NF1P21359 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
NF1P21359 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NF1P21359 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.37■□□□□ 0.53
NF1P21359 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.37■□□□□ 0.53
NF1P21359 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NF1P21359 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NF1P21359 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NF1P21359 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.37■□□□□ 0.53
NF1P21359 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NF1P21359 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NF1P21359 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.37■□□□□ 0.53
NF1P21359 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NF1P21359 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NF1P21359 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.37■□□□□ 0.53
NF1P21359 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NF1P21359 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NF1P21359 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NF1P21359 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.36■□□□□ 0.53
NF1P21359 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.36■□□□□ 0.53
NF1P21359 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NF1P21359 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NF1P21359 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NF1P21359 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NF1P21359 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.35■□□□□ 0.53
NF1P21359 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NF1P21359 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NF1P21359 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NF1P21359 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NF1P21359 AC005181.1-201ENST00000604782 1256 ntBASIC18.35■□□□□ 0.53
NF1P21359 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NF1P21359 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.34■□□□□ 0.53
NF1P21359 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NF1P21359 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NF1P21359 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NF1P21359 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NF1P21359 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.34■□□□□ 0.53
NF1P21359 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.34■□□□□ 0.53
NF1P21359 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.34■□□□□ 0.53
NF1P21359 AC097639.1-201ENST00000565519 1891 ntBASIC18.34■□□□□ 0.53
NF1P21359 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NF1P21359 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NF1P21359 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NF1P21359 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NF1P21359 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
NF1P21359 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
NF1P21359 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.33■□□□□ 0.53
NF1P21359 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.33■□□□□ 0.53
NF1P21359 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.33■□□□□ 0.53
NF1P21359 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NF1P21359 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
NF1P21359 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NF1P21359 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NF1P21359 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.33■□□□□ 0.52
NF1P21359 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NF1P21359 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NF1P21359 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.32■□□□□ 0.52
NF1P21359 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NF1P21359 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NF1P21359 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.32■□□□□ 0.52
NF1P21359 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.32■□□□□ 0.52
NF1P21359 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.32■□□□□ 0.52
NF1P21359 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NF1P21359 AC091060.1-201ENST00000623524 1766 ntBASIC18.32■□□□□ 0.52
NF1P21359 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.32■□□□□ 0.52
NF1P21359 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.32■□□□□ 0.52
NF1P21359 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.32■□□□□ 0.52
NF1P21359 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NF1P21359 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NF1P21359 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NF1P21359 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NF1P21359 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms