Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRKCAP17252 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.53■□□□□ 0.88
PRKCAP17252 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.53■□□□□ 0.88
PRKCAP17252 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRKCAP17252 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRKCAP17252 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRKCAP17252 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRKCAP17252 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.53■□□□□ 0.88
PRKCAP17252 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRKCAP17252 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PRKCAP17252 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRKCAP17252 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.53■□□□□ 0.88
PRKCAP17252 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PRKCAP17252 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRKCAP17252 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.52■□□□□ 0.88
PRKCAP17252 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PRKCAP17252 C9orf163-202ENST00000624034 2573 ntBASIC20.51■□□□□ 0.87
PRKCAP17252 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRKCAP17252 DUSP8P5-201ENST00000422884 1815 ntBASIC20.51■□□□□ 0.87
PRKCAP17252 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRKCAP17252 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PRKCAP17252 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRKCAP17252 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRKCAP17252 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRKCAP17252 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PRKCAP17252 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRKCAP17252 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PRKCAP17252 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.51■□□□□ 0.87
PRKCAP17252 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRKCAP17252 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRKCAP17252 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRKCAP17252 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRKCAP17252 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.5■□□□□ 0.87
PRKCAP17252 AL121603.2-201ENST00000557373 2117 ntBASIC20.5■□□□□ 0.87
PRKCAP17252 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.49■□□□□ 0.87
PRKCAP17252 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRKCAP17252 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRKCAP17252 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PRKCAP17252 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.49■□□□□ 0.87
PRKCAP17252 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.49■□□□□ 0.87
PRKCAP17252 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PRKCAP17252 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRKCAP17252 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PRKCAP17252 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.48■□□□□ 0.87
PRKCAP17252 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRKCAP17252 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.48■□□□□ 0.87
PRKCAP17252 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRKCAP17252 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.48■□□□□ 0.87
PRKCAP17252 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.48■□□□□ 0.87
PRKCAP17252 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.48■□□□□ 0.87
PRKCAP17252 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PRKCAP17252 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRKCAP17252 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRKCAP17252 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRKCAP17252 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRKCAP17252 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.47■□□□□ 0.87
PRKCAP17252 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PRKCAP17252 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PRKCAP17252 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRKCAP17252 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.47■□□□□ 0.87
PRKCAP17252 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRKCAP17252 AL117332.1-201ENST00000622628 974 ntBASIC20.47■□□□□ 0.87
PRKCAP17252 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRKCAP17252 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRKCAP17252 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRKCAP17252 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRKCAP17252 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRKCAP17252 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.47■□□□□ 0.87
PRKCAP17252 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRKCAP17252 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.46■□□□□ 0.87
PRKCAP17252 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRKCAP17252 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.46■□□□□ 0.87
PRKCAP17252 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRKCAP17252 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PRKCAP17252 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRKCAP17252 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.46■□□□□ 0.87
PRKCAP17252 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRKCAP17252 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRKCAP17252 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRKCAP17252 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
PRKCAP17252 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.45■□□□□ 0.86
PRKCAP17252 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRKCAP17252 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.45■□□□□ 0.86
PRKCAP17252 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms