Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLUP10909 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLUP10909 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLUP10909 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLUP10909 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.07■□□□□ 0.8
CLUP10909 TSPY13P-201ENST00000338964 914 ntBASIC20.07■□□□□ 0.8
CLUP10909 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.07■□□□□ 0.8
CLUP10909 AC004448.1-201ENST00000458332 883 ntBASIC20.07■□□□□ 0.8
CLUP10909 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLUP10909 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.07■□□□□ 0.8
CLUP10909 AC074183.2-201ENST00000623112 922 ntBASIC20.07■□□□□ 0.8
CLUP10909 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLUP10909 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.07■□□□□ 0.8
CLUP10909 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLUP10909 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLUP10909 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLUP10909 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLUP10909 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.06■□□□□ 0.8
CLUP10909 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLUP10909 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLUP10909 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLUP10909 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLUP10909 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.06■□□□□ 0.8
CLUP10909 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLUP10909 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLUP10909 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLUP10909 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLUP10909 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLUP10909 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CLUP10909 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.05■□□□□ 0.8
CLUP10909 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLUP10909 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLUP10909 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.05■□□□□ 0.8
CLUP10909 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLUP10909 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLUP10909 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.04■□□□□ 0.8
CLUP10909 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLUP10909 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.04■□□□□ 0.8
CLUP10909 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLUP10909 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLUP10909 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.04■□□□□ 0.8
CLUP10909 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.04■□□□□ 0.8
CLUP10909 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLUP10909 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLUP10909 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLUP10909 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.04■□□□□ 0.8
CLUP10909 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLUP10909 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLUP10909 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
CLUP10909 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLUP10909 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLUP10909 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLUP10909 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLUP10909 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.03■□□□□ 0.8
CLUP10909 ECEL1P1-201ENST00000373592 1742 ntBASIC20.03■□□□□ 0.8
CLUP10909 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.03■□□□□ 0.8
CLUP10909 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.03■□□□□ 0.8
CLUP10909 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLUP10909 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLUP10909 AL353803.4-201ENST00000565882 1934 ntBASIC20.03■□□□□ 0.8
CLUP10909 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLUP10909 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLUP10909 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLUP10909 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.02■□□□□ 0.8
CLUP10909 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLUP10909 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLUP10909 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLUP10909 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLUP10909 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLUP10909 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.02■□□□□ 0.8
CLUP10909 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLUP10909 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.02■□□□□ 0.8
CLUP10909 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.02■□□□□ 0.8
CLUP10909 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.02■□□□□ 0.8
CLUP10909 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLUP10909 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLUP10909 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.02■□□□□ 0.8
CLUP10909 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLUP10909 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
CLUP10909 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLUP10909 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLUP10909 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLUP10909 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.01■□□□□ 0.79
CLUP10909 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLUP10909 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CLUP10909 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CLUP10909 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLUP10909 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLUP10909 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLUP10909 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20■□□□□ 0.79
CLUP10909 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20■□□□□ 0.79
CLUP10909 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLUP10909 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CLUP10909 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20■□□□□ 0.79
CLUP10909 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20■□□□□ 0.79
CLUP10909 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20■□□□□ 0.79
CLUP10909 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20■□□□□ 0.79
CLUP10909 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLUP10909 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLUP10909 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms