Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 MKC7YDR144C 1791 nt3.83□□□□□ -1.8
RPL40AP0CH08 HIS4YCL030C 2400 nt3.83□□□□□ -1.8
RPL40AP0CH08 PHO84YML123C 1764 nt3.82□□□□□ -1.8
RPL40AP0CH08 STI1YOR027W 1770 nt3.82□□□□□ -1.8
RPL40AP0CH08 HFD1YMR110C 1599 nt3.82□□□□□ -1.8
RPL40AP0CH08 VPS73YGL104C 1461 nt3.82□□□□□ -1.8
RPL40AP0CH08 PTC1YDL006W 846 nt3.82□□□□□ -1.8
RPL40AP0CH08 YDR056CYDR056C 618 nt3.82□□□□□ -1.8
RPL40AP0CH08 BIO2YGR286C 1128 nt3.82□□□□□ -1.8
RPL40AP0CH08 DOM34YNL001W 1161 nt3.82□□□□□ -1.8
RPL40AP0CH08 FHL1YPR104C 2811 nt3.82□□□□□ -1.8
RPL40AP0CH08 GIP2YER054C 1647 nt3.81□□□□□ -1.8
RPL40AP0CH08 SEC2YNL272C 2280 nt3.81□□□□□ -1.8
RPL40AP0CH08 RPA14YDR156W 414 nt3.81□□□□□ -1.8
RPL40AP0CH08 BUD13YGL174W 801 nt3.81□□□□□ -1.8
RPL40AP0CH08 PER33YLR064W 822 nt3.81□□□□□ -1.8
RPL40AP0CH08 VPS72YDR485C 2388 nt3.81□□□□□ -1.8
RPL40AP0CH08 TRS85YDR108W 2097 nt3.8□□□□□ -1.8
RPL40AP0CH08 ULS1YOR191W 4860 nt3.8□□□□□ -1.8
RPL40AP0CH08 snR7-LsnR7-L 214 nt3.8□□□□□ -1.8
RPL40AP0CH08 PAU10YDR542W 363 nt3.8□□□□□ -1.8
RPL40AP0CH08 PAU11YGL261C 363 nt3.8□□□□□ -1.8
RPL40AP0CH08 PAU13YHL046C 363 nt3.8□□□□□ -1.8
RPL40AP0CH08 AIR1YIL079C 1083 nt3.8□□□□□ -1.8
RPL40AP0CH08 FMP33YJL161W 543 nt3.8□□□□□ -1.8
RPL40AP0CH08 PAU4YLR461W 363 nt3.8□□□□□ -1.8
RPL40AP0CH08 RPL18BYNL301C 561 nt3.8□□□□□ -1.8
RPL40AP0CH08 CAT5YOR125C 702 nt3.8□□□□□ -1.8
RPL40AP0CH08 PEX32YBR168W 1242 nt3.8□□□□□ -1.8
RPL40AP0CH08 ELP3YPL086C 1674 nt3.8□□□□□ -1.8
RPL40AP0CH08 RAD1YPL022W 3303 nt3.8□□□□□ -1.8
RPL40AP0CH08 SIN3YOL004W 4611 nt3.8□□□□□ -1.8
RPL40AP0CH08 ARO10YDR380W 1908 nt3.8□□□□□ -1.8
RPL40AP0CH08 NHX1YDR456W 1902 nt3.8□□□□□ -1.8
RPL40AP0CH08 APL6YGR261C 2430 nt3.79□□□□□ -1.8
RPL40AP0CH08 MAK32YCR019W 1092 nt3.79□□□□□ -1.8
RPL40AP0CH08 HSP30YCR021C 999 nt3.79□□□□□ -1.8
RPL40AP0CH08 SUR2YDR297W 1050 nt3.79□□□□□ -1.8
RPL40AP0CH08 KRE9YJL174W 831 nt3.79□□□□□ -1.8
RPL40AP0CH08 OCA2YNL056W 594 nt3.79□□□□□ -1.8
RPL40AP0CH08 TRF5YNL299W 1929 nt3.79□□□□□ -1.8
RPL40AP0CH08 RRN11YML043C 1524 nt3.79□□□□□ -1.8
RPL40AP0CH08 MRH4YGL064C 1686 nt3.78□□□□□ -1.8
RPL40AP0CH08 NSA2YER126C 786 nt3.78□□□□□ -1.8
RPL40AP0CH08 YML131WYML131W 1098 nt3.78□□□□□ -1.8
RPL40AP0CH08 YMR315WYMR315W 1050 nt3.78□□□□□ -1.8
RPL40AP0CH08 MIS1YBR084W 2928 nt3.78□□□□□ -1.8
RPL40AP0CH08 LAS1YKR063C 1509 nt3.78□□□□□ -1.8
RPL40AP0CH08 YNR065CYNR065C 3351 nt3.78□□□□□ -1.8
RPL40AP0CH08 DBF2YGR092W 1719 nt3.78□□□□□ -1.8
RPL40AP0CH08 PDR5YOR153W 4536 nt3.78□□□□□ -1.81
RPL40AP0CH08 MDL1YLR188W 2088 nt3.77□□□□□ -1.81
RPL40AP0CH08 VID28YIL017C 2766 nt3.77□□□□□ -1.81
RPL40AP0CH08 ADP1YCR011C 3150 nt3.77□□□□□ -1.81
RPL40AP0CH08 PRE9YGR135W 777 nt3.77□□□□□ -1.81
RPL40AP0CH08 YLR346CYLR346C 306 nt3.77□□□□□ -1.81
RPL40AP0CH08 YLR407WYLR407W 687 nt3.77□□□□□ -1.81
RPL40AP0CH08 MDM12YOL009C 816 nt3.77□□□□□ -1.81
RPL40AP0CH08 SLX1YBR228W 915 nt3.77□□□□□ -1.81
RPL40AP0CH08 SIR2YDL042C 1689 nt3.77□□□□□ -1.81
RPL40AP0CH08 GPI18YBR004C 1302 nt3.76□□□□□ -1.81
RPL40AP0CH08 AAD6YFL056C 639 nt3.76□□□□□ -1.81
RPL40AP0CH08 YML116W-AYML116W-A 303 nt3.76□□□□□ -1.81
RPL40AP0CH08 HEK2YBL032W 1146 nt3.76□□□□□ -1.81
RPL40AP0CH08 YBR219CYBR219C 384 nt3.76□□□□□ -1.81
RPL40AP0CH08 GAL4YPL248C 2646 nt3.76□□□□□ -1.81
RPL40AP0CH08 ECM22YLR228C 2445 nt3.76□□□□□ -1.81
RPL40AP0CH08 VHS3YOR054C 2025 nt3.76□□□□□ -1.81
RPL40AP0CH08 EMP47YFL048C 1338 nt3.75□□□□□ -1.81
RPL40AP0CH08 OCA4YCR095C 1089 nt3.75□□□□□ -1.81
RPL40AP0CH08 NOC2YOR206W 2133 nt3.75□□□□□ -1.81
RPL40AP0CH08 VPS69YPR087W 321 nt3.75□□□□□ -1.81
RPL40AP0CH08 SSB1YDL229W 1842 nt3.74□□□□□ -1.81
RPL40AP0CH08 SSH1YBR283C 1473 nt3.74□□□□□ -1.81
RPL40AP0CH08 THI7YLR237W 1797 nt3.74□□□□□ -1.81
RPL40AP0CH08 USA1YML029W 2517 nt3.74□□□□□ -1.81
RPL40AP0CH08 ACK1YDL203C 1872 nt3.74□□□□□ -1.81
RPL40AP0CH08 RAD52YML032C 1416 nt3.74□□□□□ -1.81
RPL40AP0CH08 YOR073W-AYOR073W-A 234 nt3.74□□□□□ -1.81
RPL40AP0CH08 HEM15YOR176W 1182 nt3.74□□□□□ -1.81
RPL40AP0CH08 HPC2YBR215W 1878 nt3.74□□□□□ -1.81
RPL40AP0CH08 PBN1YCL052C 1251 nt3.74□□□□□ -1.81
RPL40AP0CH08 SLD2YKL108W 1362 nt3.74□□□□□ -1.81
RPL40AP0CH08 HOF1YMR032W 2010 nt3.73□□□□□ -1.81
RPL40AP0CH08 YCF1YDR135C 4548 nt3.73□□□□□ -1.81
RPL40AP0CH08 YND1YER005W 1893 nt3.73□□□□□ -1.81
RPL40AP0CH08 THI13YDL244W 1023 nt3.73□□□□□ -1.81
RPL40AP0CH08 SOL4YGR248W 768 nt3.73□□□□□ -1.81
RPL40AP0CH08 THI11YJR156C 1023 nt3.73□□□□□ -1.81
RPL40AP0CH08 YMR085WYMR085W 1299 nt3.73□□□□□ -1.81
RPL40AP0CH08 KCC4YCL024W 3114 nt3.73□□□□□ -1.81
RPL40AP0CH08 YTA12YMR089C 2478 nt3.72□□□□□ -1.81
RPL40AP0CH08 MBP1YDL056W 2502 nt3.72□□□□□ -1.81
RPL40AP0CH08 KTR2YKR061W 1278 nt3.72□□□□□ -1.81
RPL40AP0CH08 HUT1YPL244C 1020 nt3.72□□□□□ -1.81
RPL40AP0CH08 SAC1YKL212W 1872 nt3.72□□□□□ -1.81
RPL40AP0CH08 AIM17YHL021C 1398 nt3.72□□□□□ -1.81
RPL40AP0CH08 FRE1YLR214W 2061 nt3.71□□□□□ -1.82
RPL40AP0CH08 GAL11YOL051W 3246 nt3.7□□□□□ -1.82
RPL40AP0CH08 RKM2YDR198C 1440 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms