Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDGFRBP09619 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PDGFRBP09619 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
PDGFRBP09619 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PDGFRBP09619 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.79■■□□□ 1.4
PDGFRBP09619 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFRBP09619 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFRBP09619 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFRBP09619 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.78■■□□□ 1.4
PDGFRBP09619 ANOS2P-203ENST00000472227 1816 ntBASIC23.78■■□□□ 1.4
PDGFRBP09619 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.78■■□□□ 1.4
PDGFRBP09619 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.78■■□□□ 1.4
PDGFRBP09619 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.78■■□□□ 1.4
PDGFRBP09619 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFRBP09619 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.78■■□□□ 1.4
PDGFRBP09619 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFRBP09619 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFRBP09619 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.77■■□□□ 1.4
PDGFRBP09619 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.77■■□□□ 1.4
PDGFRBP09619 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFRBP09619 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.77■■□□□ 1.4
PDGFRBP09619 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PDGFRBP09619 AL353803.4-201ENST00000565882 1934 ntBASIC23.77■■□□□ 1.4
PDGFRBP09619 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFRBP09619 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.77■■□□□ 1.4
PDGFRBP09619 AC011298.3-201ENST00000615796 283 ntBASIC23.77■■□□□ 1.4
PDGFRBP09619 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.77■■□□□ 1.4
PDGFRBP09619 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFRBP09619 AC019069.1-201ENST00000610008 1333 ntBASIC23.77■■□□□ 1.4
PDGFRBP09619 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFRBP09619 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFRBP09619 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFRBP09619 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFRBP09619 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PDGFRBP09619 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFRBP09619 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFRBP09619 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
PDGFRBP09619 AL031432.3-201ENST00000607698 485 ntBASIC23.76■■□□□ 1.39
PDGFRBP09619 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFRBP09619 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFRBP09619 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFRBP09619 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.75■■□□□ 1.39
PDGFRBP09619 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.75■■□□□ 1.39
PDGFRBP09619 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFRBP09619 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
PDGFRBP09619 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFRBP09619 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFRBP09619 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.75■■□□□ 1.39
PDGFRBP09619 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.75■■□□□ 1.39
PDGFRBP09619 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PDGFRBP09619 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.75■■□□□ 1.39
PDGFRBP09619 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
PDGFRBP09619 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFRBP09619 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PDGFRBP09619 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDGFRBP09619 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDGFRBP09619 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.74■■□□□ 1.39
PDGFRBP09619 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDGFRBP09619 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.74■■□□□ 1.39
PDGFRBP09619 AL355001.2-201ENST00000620617 1191 ntBASIC23.74■■□□□ 1.39
PDGFRBP09619 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.74■■□□□ 1.39
PDGFRBP09619 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDGFRBP09619 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDGFRBP09619 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.74■■□□□ 1.39
PDGFRBP09619 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDGFRBP09619 EDA-201ENST00000338901 1233 ntBASIC23.73■■□□□ 1.39
PDGFRBP09619 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDGFRBP09619 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDGFRBP09619 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDGFRBP09619 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDGFRBP09619 SUDS3P1-201ENST00000505831 966 ntBASIC23.73■■□□□ 1.39
PDGFRBP09619 AC142381.2-201ENST00000566120 298 ntBASIC23.73■■□□□ 1.39
PDGFRBP09619 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.73■■□□□ 1.39
PDGFRBP09619 AC136469.2-201ENST00000623944 1028 ntBASIC23.73■■□□□ 1.39
PDGFRBP09619 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDGFRBP09619 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PDGFRBP09619 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDGFRBP09619 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.73■■□□□ 1.39
PDGFRBP09619 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.72■■□□□ 1.39
PDGFRBP09619 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFRBP09619 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFRBP09619 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.72■■□□□ 1.39
PDGFRBP09619 AL499627.2-201ENST00000606283 725 ntBASIC23.72■■□□□ 1.39
PDGFRBP09619 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.72■■□□□ 1.39
PDGFRBP09619 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.72■■□□□ 1.39
PDGFRBP09619 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFRBP09619 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.72■■□□□ 1.39
PDGFRBP09619 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFRBP09619 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFRBP09619 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFRBP09619 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
PDGFRBP09619 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFRBP09619 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFRBP09619 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PDGFRBP09619 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFRBP09619 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.71■■□□□ 1.39
PDGFRBP09619 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.71■■□□□ 1.39
PDGFRBP09619 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFRBP09619 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFRBP09619 AC133637.1-201ENST00000624115 1537 ntBASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms