Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1AP08908 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1AP08908 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1AP08908 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 AC080038.3-201ENST00000623346 1952 ntBASIC20.35■□□□□ 0.85
HTR1AP08908 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.35■□□□□ 0.85
HTR1AP08908 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HTR1AP08908 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.35■□□□□ 0.85
HTR1AP08908 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.35■□□□□ 0.85
HTR1AP08908 AC026202.3-201ENST00000600805 1127 ntBASIC20.35■□□□□ 0.85
HTR1AP08908 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
HTR1AP08908 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HTR1AP08908 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1AP08908 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1AP08908 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1AP08908 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.34■□□□□ 0.85
HTR1AP08908 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
HTR1AP08908 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1AP08908 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1AP08908 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.34■□□□□ 0.85
HTR1AP08908 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.34■□□□□ 0.85
HTR1AP08908 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.34■□□□□ 0.85
HTR1AP08908 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1AP08908 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1AP08908 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.34■□□□□ 0.85
HTR1AP08908 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1AP08908 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HTR1AP08908 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.33■□□□□ 0.85
HTR1AP08908 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HTR1AP08908 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1AP08908 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HTR1AP08908 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1AP08908 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1AP08908 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.33■□□□□ 0.85
HTR1AP08908 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HTR1AP08908 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HTR1AP08908 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HTR1AP08908 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HTR1AP08908 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HTR1AP08908 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HTR1AP08908 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1AP08908 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1AP08908 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HTR1AP08908 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1AP08908 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.32■□□□□ 0.84
HTR1AP08908 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1AP08908 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1AP08908 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1AP08908 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1AP08908 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HTR1AP08908 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.32■□□□□ 0.84
HTR1AP08908 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
HTR1AP08908 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HTR1AP08908 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HTR1AP08908 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1AP08908 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HTR1AP08908 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HTR1AP08908 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HTR1AP08908 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1AP08908 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HTR1AP08908 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1AP08908 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1AP08908 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1AP08908 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1AP08908 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1AP08908 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.3■□□□□ 0.84
HTR1AP08908 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.3■□□□□ 0.84
HTR1AP08908 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HTR1AP08908 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1AP08908 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1AP08908 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HTR1AP08908 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1AP08908 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1AP08908 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1AP08908 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1AP08908 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.29■□□□□ 0.84
HTR1AP08908 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1AP08908 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1AP08908 AL121603.2-201ENST00000557373 2117 ntBASIC20.29■□□□□ 0.84
HTR1AP08908 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms