Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOD3P08294 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOD3P08294 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.23■□□□□ 0.67
SOD3P08294 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.23■□□□□ 0.67
SOD3P08294 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.23■□□□□ 0.67
SOD3P08294 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.23■□□□□ 0.67
SOD3P08294 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SOD3P08294 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.23■□□□□ 0.67
SOD3P08294 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOD3P08294 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.23■□□□□ 0.67
SOD3P08294 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
SOD3P08294 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SOD3P08294 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SOD3P08294 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.22■□□□□ 0.67
SOD3P08294 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOD3P08294 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOD3P08294 AP003733.4-201ENST00000623785 1697 ntBASIC19.22■□□□□ 0.67
SOD3P08294 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.22■□□□□ 0.67
SOD3P08294 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.22■□□□□ 0.67
SOD3P08294 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SOD3P08294 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.22■□□□□ 0.67
SOD3P08294 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.22■□□□□ 0.67
SOD3P08294 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.22■□□□□ 0.67
SOD3P08294 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SOD3P08294 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.22■□□□□ 0.67
SOD3P08294 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOD3P08294 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.21■□□□□ 0.67
SOD3P08294 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.21■□□□□ 0.67
SOD3P08294 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.21■□□□□ 0.67
SOD3P08294 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SOD3P08294 AC141586.4-201ENST00000624558 1573 ntBASIC19.21■□□□□ 0.67
SOD3P08294 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOD3P08294 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 AC079834.2-201ENST00000609776 1949 ntBASIC19.2■□□□□ 0.66
SOD3P08294 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.2■□□□□ 0.66
SOD3P08294 AL162430.1-201ENST00000480705 870 ntBASIC19.2■□□□□ 0.66
SOD3P08294 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.2■□□□□ 0.66
SOD3P08294 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.2■□□□□ 0.66
SOD3P08294 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.2■□□□□ 0.66
SOD3P08294 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SOD3P08294 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOD3P08294 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
SOD3P08294 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.19■□□□□ 0.66
SOD3P08294 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOD3P08294 AC126544.1-201ENST00000580842 1059 ntBASIC19.19■□□□□ 0.66
SOD3P08294 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOD3P08294 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.19■□□□□ 0.66
SOD3P08294 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOD3P08294 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SOD3P08294 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SOD3P08294 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOD3P08294 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.18■□□□□ 0.66
SOD3P08294 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOD3P08294 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOD3P08294 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SOD3P08294 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SOD3P08294 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.17■□□□□ 0.66
SOD3P08294 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SOD3P08294 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOD3P08294 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOD3P08294 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.17■□□□□ 0.66
SOD3P08294 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.17■□□□□ 0.66
SOD3P08294 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.17■□□□□ 0.66
SOD3P08294 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.17■□□□□ 0.66
SOD3P08294 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOD3P08294 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOD3P08294 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOD3P08294 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.17■□□□□ 0.66
SOD3P08294 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOD3P08294 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.16■□□□□ 0.66
SOD3P08294 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOD3P08294 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SOD3P08294 SLC47A1P1-202ENST00000449666 945 ntBASIC19.16■□□□□ 0.66
SOD3P08294 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOD3P08294 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.16■□□□□ 0.66
SOD3P08294 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOD3P08294 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SOD3P08294 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOD3P08294 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOD3P08294 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOD3P08294 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOD3P08294 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SOD3P08294 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.15■□□□□ 0.66
SOD3P08294 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms