Protein–RNA interactions for Protein: P05771

PRKCB, Protein kinase C beta type, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCBP05771 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.45■■□□□ 1.5
PRKCBP05771 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.45■■□□□ 1.5
PRKCBP05771 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.45■■□□□ 1.5
PRKCBP05771 AC133637.1-201ENST00000624115 1537 ntBASIC24.45■■□□□ 1.5
PRKCBP05771 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRKCBP05771 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRKCBP05771 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRKCBP05771 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PRKCBP05771 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRKCBP05771 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRKCBP05771 MIR939-201ENST00000401314 82 ntBASIC24.44■■□□□ 1.5
PRKCBP05771 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PRKCBP05771 AL136967.2-201ENST00000623968 743 ntBASIC24.44■■□□□ 1.5
PRKCBP05771 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PRKCBP05771 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
PRKCBP05771 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.44■■□□□ 1.5
PRKCBP05771 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PRKCBP05771 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRKCBP05771 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRKCBP05771 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.43■■□□□ 1.5
PRKCBP05771 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRKCBP05771 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRKCBP05771 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRKCBP05771 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRKCBP05771 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRKCBP05771 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.42■■□□□ 1.5
PRKCBP05771 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
PRKCBP05771 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.42■■□□□ 1.5
PRKCBP05771 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.42■■□□□ 1.5
PRKCBP05771 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.42■■□□□ 1.5
PRKCBP05771 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.42■■□□□ 1.5
PRKCBP05771 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRKCBP05771 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRKCBP05771 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRKCBP05771 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRKCBP05771 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRKCBP05771 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.41■■□□□ 1.5
PRKCBP05771 AL353803.4-201ENST00000565882 1934 ntBASIC24.41■■□□□ 1.5
PRKCBP05771 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRKCBP05771 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRKCBP05771 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.41■■□□□ 1.5
PRKCBP05771 ANOS2P-203ENST00000472227 1816 ntBASIC24.41■■□□□ 1.5
PRKCBP05771 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRKCBP05771 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.41■■□□□ 1.5
PRKCBP05771 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.41■■□□□ 1.5
PRKCBP05771 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
PRKCBP05771 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.41■■□□□ 1.5
PRKCBP05771 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PRKCBP05771 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PRKCBP05771 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRKCBP05771 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRKCBP05771 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.4■■□□□ 1.5
PRKCBP05771 MIR935-201ENST00000401179 91 ntBASIC24.4■■□□□ 1.5
PRKCBP05771 AC008764.7-201ENST00000593779 1081 ntBASIC24.4■■□□□ 1.5
PRKCBP05771 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.4■■□□□ 1.5
PRKCBP05771 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRKCBP05771 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRKCBP05771 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRKCBP05771 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
PRKCBP05771 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
PRKCBP05771 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.39■■□□□ 1.5
PRKCBP05771 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRKCBP05771 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRKCBP05771 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PRKCBP05771 AC091305.1-201ENST00000479476 895 ntBASIC24.39■■□□□ 1.49
PRKCBP05771 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.39■■□□□ 1.49
PRKCBP05771 AC027682.1-201ENST00000562846 899 ntBASIC24.39■■□□□ 1.49
PRKCBP05771 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PRKCBP05771 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
PRKCBP05771 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRKCBP05771 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRKCBP05771 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
PRKCBP05771 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.38■■□□□ 1.49
PRKCBP05771 BX842568.3-201ENST00000418104 571 ntBASIC24.38■■□□□ 1.49
PRKCBP05771 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PRKCBP05771 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PRKCBP05771 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRKCBP05771 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PRKCBP05771 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRKCBP05771 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRKCBP05771 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PRKCBP05771 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.37■■□□□ 1.49
PRKCBP05771 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.37■■□□□ 1.49
PRKCBP05771 AC099791.1-201ENST00000416440 715 ntBASIC24.37■■□□□ 1.49
PRKCBP05771 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRKCBP05771 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PRKCBP05771 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.37■■□□□ 1.49
PRKCBP05771 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PRKCBP05771 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.36■■□□□ 1.49
PRKCBP05771 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRKCBP05771 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRKCBP05771 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRKCBP05771 SLC47A1P1-202ENST00000449666 945 ntBASIC24.36■■□□□ 1.49
PRKCBP05771 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.36■■□□□ 1.49
PRKCBP05771 AC233992.3-201ENST00000607491 485 ntBASIC24.36■■□□□ 1.49
PRKCBP05771 CA15P2-201ENST00000611168 834 ntBASIC24.36■■□□□ 1.49
PRKCBP05771 RASA4CP-201ENST00000424092 1398 ntBASIC24.36■■□□□ 1.49
PRKCBP05771 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.35■■□□□ 1.49
PRKCBP05771 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.35■■□□□ 1.49
PRKCBP05771 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms