Protein–RNA interactions for Protein: P05000

IFNW1, Interferon omega-1, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNW1P05000 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.66■□□□□ 0.9
IFNW1P05000 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.66■□□□□ 0.9
IFNW1P05000 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNW1P05000 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNW1P05000 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.65■□□□□ 0.9
IFNW1P05000 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
IFNW1P05000 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
IFNW1P05000 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.65■□□□□ 0.9
IFNW1P05000 ATP5G2P3-201ENST00000429083 425 ntBASIC20.65■□□□□ 0.9
IFNW1P05000 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNW1P05000 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IFNW1P05000 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
IFNW1P05000 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.64■□□□□ 0.9
IFNW1P05000 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IFNW1P05000 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IFNW1P05000 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.64■□□□□ 0.9
IFNW1P05000 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 AC004987.1-201ENST00000428627 508 ntBASIC20.64■□□□□ 0.89
IFNW1P05000 PVT1_1.1-201ENST00000615125 194 ntBASIC20.64■□□□□ 0.89
IFNW1P05000 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNW1P05000 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
IFNW1P05000 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
IFNW1P05000 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
IFNW1P05000 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.63■□□□□ 0.89
IFNW1P05000 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.63■□□□□ 0.89
IFNW1P05000 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.63■□□□□ 0.89
IFNW1P05000 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
IFNW1P05000 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
IFNW1P05000 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
IFNW1P05000 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNW1P05000 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
IFNW1P05000 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNW1P05000 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNW1P05000 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
IFNW1P05000 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IFNW1P05000 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.62■□□□□ 0.89
IFNW1P05000 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.62■□□□□ 0.89
IFNW1P05000 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNW1P05000 AC137767.1-201ENST00000602918 1920 ntBASIC20.62■□□□□ 0.89
IFNW1P05000 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNW1P05000 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.62■□□□□ 0.89
IFNW1P05000 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNW1P05000 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.62■□□□□ 0.89
IFNW1P05000 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNW1P05000 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNW1P05000 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNW1P05000 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
IFNW1P05000 AC010980.1-201ENST00000587192 1142 ntBASIC20.61■□□□□ 0.89
IFNW1P05000 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.61■□□□□ 0.89
IFNW1P05000 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IFNW1P05000 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IFNW1P05000 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNW1P05000 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
IFNW1P05000 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNW1P05000 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
IFNW1P05000 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNW1P05000 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
IFNW1P05000 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
IFNW1P05000 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNW1P05000 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNW1P05000 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.6■□□□□ 0.89
IFNW1P05000 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.6■□□□□ 0.89
IFNW1P05000 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.6■□□□□ 0.89
IFNW1P05000 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.6■□□□□ 0.89
IFNW1P05000 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNW1P05000 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNW1P05000 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNW1P05000 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
IFNW1P05000 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNW1P05000 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
IFNW1P05000 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFNW1P05000 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFNW1P05000 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms