Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
HLA-DRAP01903 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
HLA-DRAP01903 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HLA-DRAP01903 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
HLA-DRAP01903 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HLA-DRAP01903 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HLA-DRAP01903 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
HLA-DRAP01903 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
HLA-DRAP01903 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HLA-DRAP01903 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.05■■□□□ 1.44
HLA-DRAP01903 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HLA-DRAP01903 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HLA-DRAP01903 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.05■■□□□ 1.44
HLA-DRAP01903 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
HLA-DRAP01903 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HLA-DRAP01903 AC099791.2-201ENST00000605725 427 ntBASIC24.04■■□□□ 1.44
HLA-DRAP01903 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.04■■□□□ 1.44
HLA-DRAP01903 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.04■■□□□ 1.44
HLA-DRAP01903 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HLA-DRAP01903 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
HLA-DRAP01903 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HLA-DRAP01903 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.03■■□□□ 1.44
HLA-DRAP01903 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
HLA-DRAP01903 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
HLA-DRAP01903 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HLA-DRAP01903 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HLA-DRAP01903 AC006455.2-201ENST00000429931 906 ntBASIC24.03■■□□□ 1.44
HLA-DRAP01903 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.03■■□□□ 1.44
HLA-DRAP01903 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
HLA-DRAP01903 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.03■■□□□ 1.44
HLA-DRAP01903 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
HLA-DRAP01903 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
HLA-DRAP01903 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.03■■□□□ 1.44
HLA-DRAP01903 C9orf163-202ENST00000624034 2573 ntBASIC24.02■■□□□ 1.44
HLA-DRAP01903 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
HLA-DRAP01903 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HLA-DRAP01903 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
HLA-DRAP01903 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.02■■□□□ 1.44
HLA-DRAP01903 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HLA-DRAP01903 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HLA-DRAP01903 AL136116.3-201ENST00000402907 1138 ntBASIC24.02■■□□□ 1.44
HLA-DRAP01903 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HLA-DRAP01903 AC241377.3-202ENST00000626088 1088 ntBASIC24.02■■□□□ 1.44
HLA-DRAP01903 AC241585.3-202ENST00000628937 1088 ntBASIC24.02■■□□□ 1.44
HLA-DRAP01903 AC245100.8-202ENST00000629247 1058 ntBASIC24.02■■□□□ 1.44
HLA-DRAP01903 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
HLA-DRAP01903 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HLA-DRAP01903 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.02■■□□□ 1.44
HLA-DRAP01903 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
HLA-DRAP01903 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
HLA-DRAP01903 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.01■■□□□ 1.43
HLA-DRAP01903 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.01■■□□□ 1.43
HLA-DRAP01903 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HLA-DRAP01903 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.01■■□□□ 1.43
HLA-DRAP01903 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.01■■□□□ 1.43
HLA-DRAP01903 AC009086.3-201ENST00000623486 1008 ntBASIC24.01■■□□□ 1.43
HLA-DRAP01903 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.01■■□□□ 1.43
HLA-DRAP01903 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.01■■□□□ 1.43
HLA-DRAP01903 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24■■□□□ 1.43
HLA-DRAP01903 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HLA-DRAP01903 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HLA-DRAP01903 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
HLA-DRAP01903 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24■■□□□ 1.43
HLA-DRAP01903 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
HLA-DRAP01903 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.99■■□□□ 1.43
HLA-DRAP01903 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.99■■□□□ 1.43
HLA-DRAP01903 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HLA-DRAP01903 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
HLA-DRAP01903 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.99■■□□□ 1.43
HLA-DRAP01903 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.99■■□□□ 1.43
HLA-DRAP01903 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.99■■□□□ 1.43
HLA-DRAP01903 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HLA-DRAP01903 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.98■■□□□ 1.43
HLA-DRAP01903 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
HLA-DRAP01903 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HLA-DRAP01903 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
HLA-DRAP01903 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.98■■□□□ 1.43
HLA-DRAP01903 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HLA-DRAP01903 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
HLA-DRAP01903 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.98■■□□□ 1.43
HLA-DRAP01903 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.98■■□□□ 1.43
HLA-DRAP01903 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.98■■□□□ 1.43
HLA-DRAP01903 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HLA-DRAP01903 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HLA-DRAP01903 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HLA-DRAP01903 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HLA-DRAP01903 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HLA-DRAP01903 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
HLA-DRAP01903 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HLA-DRAP01903 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HLA-DRAP01903 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.97■■□□□ 1.43
HLA-DRAP01903 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
HLA-DRAP01903 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
HLA-DRAP01903 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HLA-DRAP01903 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.96■■□□□ 1.43
HLA-DRAP01903 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HLA-DRAP01903 AC008406.3-201ENST00000620001 1374 ntBASIC23.96■■□□□ 1.43
HLA-DRAP01903 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HLA-DRAP01903 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
HLA-DRAP01903 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms