Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IFNA1P01562 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.65■□□□□ 0.42
IFNA1P01562 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
IFNA1P01562 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.65■□□□□ 0.42
IFNA1P01562 AC021231.2-201ENST00000594613 730 ntBASIC17.65■□□□□ 0.42
IFNA1P01562 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.65■□□□□ 0.42
IFNA1P01562 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IFNA1P01562 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFNA1P01562 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
IFNA1P01562 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFNA1P01562 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.64■□□□□ 0.41
IFNA1P01562 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
IFNA1P01562 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.64■□□□□ 0.41
IFNA1P01562 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
IFNA1P01562 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IFNA1P01562 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFNA1P01562 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFNA1P01562 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.63■□□□□ 0.41
IFNA1P01562 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 AC044849.2-201ENST00000606596 710 ntBASIC17.63■□□□□ 0.41
IFNA1P01562 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.63■□□□□ 0.41
IFNA1P01562 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.63■□□□□ 0.41
IFNA1P01562 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
IFNA1P01562 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFNA1P01562 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.62■□□□□ 0.41
IFNA1P01562 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.62■□□□□ 0.41
IFNA1P01562 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFNA1P01562 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.62■□□□□ 0.41
IFNA1P01562 FBXW4P1-201ENST00000426721 2239 ntBASIC17.62■□□□□ 0.41
IFNA1P01562 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFNA1P01562 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFNA1P01562 DUX4L29-201ENST00000425409 679 ntBASIC17.62■□□□□ 0.41
IFNA1P01562 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.62■□□□□ 0.41
IFNA1P01562 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.62■□□□□ 0.41
IFNA1P01562 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
IFNA1P01562 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IFNA1P01562 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.61■□□□□ 0.41
IFNA1P01562 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFNA1P01562 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.61■□□□□ 0.41
IFNA1P01562 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFNA1P01562 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFNA1P01562 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFNA1P01562 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFNA1P01562 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFNA1P01562 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
IFNA1P01562 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.6■□□□□ 0.41
IFNA1P01562 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.6■□□□□ 0.41
IFNA1P01562 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 AP006261.1-201ENST00000584783 668 ntBASIC17.6■□□□□ 0.41
IFNA1P01562 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.6■□□□□ 0.41
IFNA1P01562 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IFNA1P01562 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.59■□□□□ 0.41
IFNA1P01562 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFNA1P01562 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.59■□□□□ 0.41
IFNA1P01562 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
IFNA1P01562 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IFNA1P01562 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
IFNA1P01562 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
IFNA1P01562 AC087741.3-201ENST00000624270 1347 ntBASIC17.58■□□□□ 0.4
IFNA1P01562 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.58■□□□□ 0.4
IFNA1P01562 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
IFNA1P01562 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFNA1P01562 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFNA1P01562 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms