Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH8O95206 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH8O95206 DUX4L4-201ENST00000566884 1269 ntBASIC22.33■■□□□ 1.17
PCDH8O95206 RARRES2P6-201ENST00000567333 442 ntBASIC22.33■■□□□ 1.17
PCDH8O95206 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
PCDH8O95206 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDH8O95206 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDH8O95206 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH8O95206 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH8O95206 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH8O95206 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH8O95206 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH8O95206 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH8O95206 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH8O95206 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDH8O95206 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH8O95206 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH8O95206 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH8O95206 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.31■■□□□ 1.16
PCDH8O95206 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH8O95206 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH8O95206 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH8O95206 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PCDH8O95206 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH8O95206 IRS3P-201ENST00000223076 1006 ntBASIC22.3■■□□□ 1.16
PCDH8O95206 SLC47A1P1-202ENST00000449666 945 ntBASIC22.3■■□□□ 1.16
PCDH8O95206 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDH8O95206 AL499627.2-201ENST00000606283 725 ntBASIC22.3■■□□□ 1.16
PCDH8O95206 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH8O95206 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH8O95206 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH8O95206 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH8O95206 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH8O95206 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH8O95206 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH8O95206 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH8O95206 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH8O95206 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH8O95206 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH8O95206 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDH8O95206 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH8O95206 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH8O95206 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH8O95206 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDH8O95206 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH8O95206 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH8O95206 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH8O95206 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDH8O95206 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH8O95206 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.28■■□□□ 1.16
PCDH8O95206 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH8O95206 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH8O95206 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PCDH8O95206 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH8O95206 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH8O95206 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH8O95206 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH8O95206 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDH8O95206 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH8O95206 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDH8O95206 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH8O95206 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PCDH8O95206 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH8O95206 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH8O95206 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH8O95206 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PCDH8O95206 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH8O95206 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH8O95206 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH8O95206 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH8O95206 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDH8O95206 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH8O95206 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PCDH8O95206 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH8O95206 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH8O95206 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH8O95206 AC026271.2-201ENST00000428091 497 ntBASIC22.25■■□□□ 1.15
PCDH8O95206 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH8O95206 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH8O95206 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH8O95206 AC079630.1-202ENST00000618127 1840 ntBASIC22.24■■□□□ 1.15
PCDH8O95206 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH8O95206 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH8O95206 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDH8O95206 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH8O95206 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH8O95206 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH8O95206 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms