Protein–RNA interactions for Protein: O95183

VAMP5, Vesicle-associated membrane protein 5, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP5O95183 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAMP5O95183 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VAMP5O95183 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAMP5O95183 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.88■□□□□ 0.77
VAMP5O95183 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAMP5O95183 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
VAMP5O95183 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAMP5O95183 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.88■□□□□ 0.77
VAMP5O95183 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.88■□□□□ 0.77
VAMP5O95183 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VAMP5O95183 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAMP5O95183 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.88■□□□□ 0.77
VAMP5O95183 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VAMP5O95183 AC131281.2-201ENST00000520478 145 ntBASIC19.88■□□□□ 0.77
VAMP5O95183 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.88■□□□□ 0.77
VAMP5O95183 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAMP5O95183 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
VAMP5O95183 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAMP5O95183 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VAMP5O95183 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VAMP5O95183 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VAMP5O95183 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAMP5O95183 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAMP5O95183 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAMP5O95183 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.86■□□□□ 0.77
VAMP5O95183 DUX4L19-201ENST00000557448 1267 ntBASIC19.86■□□□□ 0.77
VAMP5O95183 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
VAMP5O95183 MIR4466-201ENST00000606121 54 ntBASIC19.86■□□□□ 0.77
VAMP5O95183 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAMP5O95183 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAMP5O95183 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAMP5O95183 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
VAMP5O95183 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.85■□□□□ 0.77
VAMP5O95183 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAMP5O95183 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.85■□□□□ 0.77
VAMP5O95183 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
VAMP5O95183 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAMP5O95183 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAMP5O95183 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VAMP5O95183 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VAMP5O95183 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VAMP5O95183 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.85■□□□□ 0.77
VAMP5O95183 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.85■□□□□ 0.77
VAMP5O95183 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP5O95183 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP5O95183 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP5O95183 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.84■□□□□ 0.77
VAMP5O95183 AC099791.2-201ENST00000605725 427 ntBASIC19.84■□□□□ 0.77
VAMP5O95183 AL499627.2-201ENST00000606283 725 ntBASIC19.84■□□□□ 0.77
VAMP5O95183 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.84■□□□□ 0.77
VAMP5O95183 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.84■□□□□ 0.77
VAMP5O95183 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP5O95183 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP5O95183 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP5O95183 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.84■□□□□ 0.77
VAMP5O95183 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP5O95183 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
VAMP5O95183 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.84■□□□□ 0.77
VAMP5O95183 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VAMP5O95183 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VAMP5O95183 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VAMP5O95183 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.83■□□□□ 0.77
VAMP5O95183 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VAMP5O95183 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VAMP5O95183 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VAMP5O95183 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.83■□□□□ 0.76
VAMP5O95183 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.82■□□□□ 0.76
VAMP5O95183 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.82■□□□□ 0.76
VAMP5O95183 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.82■□□□□ 0.76
VAMP5O95183 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.82■□□□□ 0.76
VAMP5O95183 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP5O95183 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.82■□□□□ 0.76
VAMP5O95183 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.82■□□□□ 0.76
VAMP5O95183 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
VAMP5O95183 AC008406.3-201ENST00000620001 1374 ntBASIC19.82■□□□□ 0.76
VAMP5O95183 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VAMP5O95183 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP5O95183 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
VAMP5O95183 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
VAMP5O95183 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.81■□□□□ 0.76
VAMP5O95183 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP5O95183 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms