Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.48■■□□□ 1.51
UBE4BO95155 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
UBE4BO95155 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.48■■□□□ 1.51
UBE4BO95155 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.48■■□□□ 1.51
UBE4BO95155 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
UBE4BO95155 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
UBE4BO95155 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
UBE4BO95155 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
UBE4BO95155 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
UBE4BO95155 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.47■■□□□ 1.51
UBE4BO95155 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.47■■□□□ 1.51
UBE4BO95155 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.47■■□□□ 1.51
UBE4BO95155 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.47■■□□□ 1.51
UBE4BO95155 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.47■■□□□ 1.51
UBE4BO95155 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
UBE4BO95155 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.47■■□□□ 1.51
UBE4BO95155 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
UBE4BO95155 AC012676.1-201ENST00000574705 1949 ntBASIC24.47■■□□□ 1.51
UBE4BO95155 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
UBE4BO95155 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.46■■□□□ 1.51
UBE4BO95155 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.46■■□□□ 1.51
UBE4BO95155 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.46■■□□□ 1.51
UBE4BO95155 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.46■■□□□ 1.51
UBE4BO95155 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBE4BO95155 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.45■■□□□ 1.51
UBE4BO95155 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
UBE4BO95155 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
UBE4BO95155 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.45■■□□□ 1.5
UBE4BO95155 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
UBE4BO95155 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
UBE4BO95155 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
UBE4BO95155 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
UBE4BO95155 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.44■■□□□ 1.5
UBE4BO95155 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.44■■□□□ 1.5
UBE4BO95155 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
UBE4BO95155 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
UBE4BO95155 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
UBE4BO95155 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.44■■□□□ 1.5
UBE4BO95155 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
UBE4BO95155 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
UBE4BO95155 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
UBE4BO95155 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.44■■□□□ 1.5
UBE4BO95155 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
UBE4BO95155 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
UBE4BO95155 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
UBE4BO95155 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.43■■□□□ 1.5
UBE4BO95155 SRD5A1P1-201ENST00000442297 786 ntBASIC24.43■■□□□ 1.5
UBE4BO95155 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.43■■□□□ 1.5
UBE4BO95155 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.43■■□□□ 1.5
UBE4BO95155 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.43■■□□□ 1.5
UBE4BO95155 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.43■■□□□ 1.5
UBE4BO95155 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.42■■□□□ 1.5
UBE4BO95155 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.42■■□□□ 1.5
UBE4BO95155 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.42■■□□□ 1.5
UBE4BO95155 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.42■■□□□ 1.5
UBE4BO95155 AC131281.2-201ENST00000520478 145 ntBASIC24.42■■□□□ 1.5
UBE4BO95155 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UBE4BO95155 AL499627.2-201ENST00000606283 725 ntBASIC24.42■■□□□ 1.5
UBE4BO95155 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.42■■□□□ 1.5
UBE4BO95155 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
UBE4BO95155 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBE4BO95155 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UBE4BO95155 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
UBE4BO95155 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.41■■□□□ 1.5
UBE4BO95155 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.41■■□□□ 1.5
UBE4BO95155 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
UBE4BO95155 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UBE4BO95155 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.4■■□□□ 1.5
UBE4BO95155 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
UBE4BO95155 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.4■■□□□ 1.5
UBE4BO95155 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.4■■□□□ 1.5
UBE4BO95155 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
UBE4BO95155 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.4■■□□□ 1.5
UBE4BO95155 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
UBE4BO95155 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
UBE4BO95155 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
UBE4BO95155 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
UBE4BO95155 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
UBE4BO95155 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
UBE4BO95155 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.4■■□□□ 1.5
UBE4BO95155 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
UBE4BO95155 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
UBE4BO95155 MIR4466-201ENST00000606121 54 ntBASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms