Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-2O95096 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-2O95096 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX2-2O95096 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NKX2-2O95096 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NKX2-2O95096 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NKX2-2O95096 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NKX2-2O95096 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NKX2-2O95096 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-2O95096 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.64■□□□□ 0.89
NKX2-2O95096 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.64■□□□□ 0.89
NKX2-2O95096 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-2O95096 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-2O95096 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-2O95096 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-2O95096 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-2O95096 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-2O95096 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
NKX2-2O95096 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKX2-2O95096 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NKX2-2O95096 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKX2-2O95096 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NKX2-2O95096 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.63■□□□□ 0.89
NKX2-2O95096 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
NKX2-2O95096 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.63■□□□□ 0.89
NKX2-2O95096 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.63■□□□□ 0.89
NKX2-2O95096 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NKX2-2O95096 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NKX2-2O95096 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.62■□□□□ 0.89
NKX2-2O95096 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NKX2-2O95096 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NKX2-2O95096 AC133561.1-201ENST00000568600 2415 ntBASIC20.62■□□□□ 0.89
NKX2-2O95096 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX2-2O95096 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.62■□□□□ 0.89
NKX2-2O95096 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.62■□□□□ 0.89
NKX2-2O95096 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.62■□□□□ 0.89
NKX2-2O95096 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.62■□□□□ 0.89
NKX2-2O95096 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX2-2O95096 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-2O95096 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.61■□□□□ 0.89
NKX2-2O95096 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-2O95096 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-2O95096 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.61■□□□□ 0.89
NKX2-2O95096 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.61■□□□□ 0.89
NKX2-2O95096 AL512631.2-201ENST00000604634 923 ntBASIC20.61■□□□□ 0.89
NKX2-2O95096 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-2O95096 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
NKX2-2O95096 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-2O95096 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.61■□□□□ 0.89
NKX2-2O95096 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-2O95096 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-2O95096 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-2O95096 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-2O95096 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NKX2-2O95096 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.6■□□□□ 0.89
NKX2-2O95096 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-2O95096 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-2O95096 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-2O95096 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NKX2-2O95096 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.6■□□□□ 0.89
NKX2-2O95096 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.6■□□□□ 0.89
NKX2-2O95096 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.6■□□□□ 0.89
NKX2-2O95096 AC009086.3-201ENST00000623486 1008 ntBASIC20.6■□□□□ 0.89
NKX2-2O95096 AC241377.3-202ENST00000626088 1088 ntBASIC20.6■□□□□ 0.89
NKX2-2O95096 AC241585.3-202ENST00000628937 1088 ntBASIC20.6■□□□□ 0.89
NKX2-2O95096 AC245100.8-202ENST00000629247 1058 ntBASIC20.6■□□□□ 0.89
NKX2-2O95096 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-2O95096 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
NKX2-2O95096 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NKX2-2O95096 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-2O95096 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NKX2-2O95096 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.6■□□□□ 0.89
NKX2-2O95096 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-2O95096 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.59■□□□□ 0.89
NKX2-2O95096 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.59■□□□□ 0.89
NKX2-2O95096 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NKX2-2O95096 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.59■□□□□ 0.89
NKX2-2O95096 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-2O95096 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.59■□□□□ 0.89
NKX2-2O95096 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.59■□□□□ 0.89
NKX2-2O95096 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-2O95096 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.59■□□□□ 0.89
NKX2-2O95096 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.59■□□□□ 0.89
NKX2-2O95096 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NKX2-2O95096 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NKX2-2O95096 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKX2-2O95096 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NKX2-2O95096 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.58■□□□□ 0.89
NKX2-2O95096 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.58■□□□□ 0.89
NKX2-2O95096 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.58■□□□□ 0.89
NKX2-2O95096 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.58■□□□□ 0.89
NKX2-2O95096 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NKX2-2O95096 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NKX2-2O95096 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NKX2-2O95096 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NKX2-2O95096 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.58■□□□□ 0.88
NKX2-2O95096 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.57■□□□□ 0.88
NKX2-2O95096 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-2O95096 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-2O95096 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms