Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.83■□□□□ 0.6
PDCD6O75340 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD6O75340 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD6O75340 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.82■□□□□ 0.6
PDCD6O75340 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.82■□□□□ 0.6
PDCD6O75340 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.82■□□□□ 0.6
PDCD6O75340 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.82■□□□□ 0.6
PDCD6O75340 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.82■□□□□ 0.6
PDCD6O75340 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.82■□□□□ 0.6
PDCD6O75340 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD6O75340 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD6O75340 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDCD6O75340 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
PDCD6O75340 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD6O75340 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD6O75340 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD6O75340 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.81■□□□□ 0.6
PDCD6O75340 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDCD6O75340 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDCD6O75340 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PDCD6O75340 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD6O75340 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD6O75340 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDCD6O75340 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD6O75340 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PDCD6O75340 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD6O75340 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.81■□□□□ 0.6
PDCD6O75340 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.81■□□□□ 0.6
PDCD6O75340 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD6O75340 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD6O75340 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD6O75340 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD6O75340 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD6O75340 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD6O75340 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD6O75340 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD6O75340 YBX1P4-201ENST00000392794 808 ntBASIC18.8■□□□□ 0.6
PDCD6O75340 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.8■□□□□ 0.6
PDCD6O75340 AC103834.1-201ENST00000520383 144 ntBASIC18.8■□□□□ 0.6
PDCD6O75340 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.8■□□□□ 0.6
PDCD6O75340 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PDCD6O75340 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.8■□□□□ 0.6
PDCD6O75340 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDCD6O75340 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PDCD6O75340 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDCD6O75340 AC144652.1-201ENST00000609974 1624 ntBASIC18.79■□□□□ 0.6
PDCD6O75340 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PDCD6O75340 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.79■□□□□ 0.6
PDCD6O75340 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD6O75340 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD6O75340 CLDN5-201ENST00000403084 2357 ntBASIC18.79■□□□□ 0.6
PDCD6O75340 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PDCD6O75340 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD6O75340 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD6O75340 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD6O75340 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD6O75340 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD6O75340 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDCD6O75340 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.78■□□□□ 0.6
PDCD6O75340 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
PDCD6O75340 AC103724.3-201ENST00000564481 992 ntBASIC18.78■□□□□ 0.6
PDCD6O75340 AL033527.3-201ENST00000566366 1196 ntBASIC18.78■□□□□ 0.6
PDCD6O75340 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD6O75340 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD6O75340 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD6O75340 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD6O75340 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PDCD6O75340 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDCD6O75340 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD6O75340 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.78■□□□□ 0.6
PDCD6O75340 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD6O75340 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD6O75340 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD6O75340 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDCD6O75340 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD6O75340 KRT8P33-201ENST00000508125 1423 ntBASIC18.77■□□□□ 0.6
PDCD6O75340 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD6O75340 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.77■□□□□ 0.6
PDCD6O75340 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDCD6O75340 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD6O75340 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.77■□□□□ 0.6
PDCD6O75340 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD6O75340 AC137630.3-201ENST00000607245 391 ntBASIC18.77■□□□□ 0.6
PDCD6O75340 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.77■□□□□ 0.6
PDCD6O75340 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PDCD6O75340 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD6O75340 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD6O75340 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDCD6O75340 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDCD6O75340 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDCD6O75340 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.76■□□□□ 0.59
PDCD6O75340 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms