Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.73■■□□□ 1.39
TBC1D4O60343 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.73■■□□□ 1.39
TBC1D4O60343 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D4O60343 LINC01124-201ENST00000409786 2117 ntBASIC23.73■■□□□ 1.39
TBC1D4O60343 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.73■■□□□ 1.39
TBC1D4O60343 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D4O60343 AC087623.3-201ENST00000607047 1098 ntBASIC23.73■■□□□ 1.39
TBC1D4O60343 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
TBC1D4O60343 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D4O60343 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D4O60343 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D4O60343 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D4O60343 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D4O60343 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D4O60343 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D4O60343 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.72■■□□□ 1.39
TBC1D4O60343 AC126544.1-201ENST00000580842 1059 ntBASIC23.72■■□□□ 1.39
TBC1D4O60343 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
TBC1D4O60343 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D4O60343 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.72■■□□□ 1.39
TBC1D4O60343 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
TBC1D4O60343 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D4O60343 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TBC1D4O60343 AC004812.2-201ENST00000611079 2094 ntBASIC23.71■■□□□ 1.39
TBC1D4O60343 LINC01529-204ENST00000636474 1715 ntBASIC23.71■■□□□ 1.39
TBC1D4O60343 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TBC1D4O60343 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TBC1D4O60343 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.71■■□□□ 1.39
TBC1D4O60343 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.71■■□□□ 1.39
TBC1D4O60343 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.71■■□□□ 1.39
TBC1D4O60343 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.71■■□□□ 1.39
TBC1D4O60343 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.71■■□□□ 1.39
TBC1D4O60343 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TBC1D4O60343 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.71■■□□□ 1.39
TBC1D4O60343 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.71■■□□□ 1.39
TBC1D4O60343 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.7■■□□□ 1.39
TBC1D4O60343 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.7■■□□□ 1.39
TBC1D4O60343 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TBC1D4O60343 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TBC1D4O60343 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TBC1D4O60343 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.7■■□□□ 1.38
TBC1D4O60343 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TBC1D4O60343 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TBC1D4O60343 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TBC1D4O60343 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.69■■□□□ 1.38
TBC1D4O60343 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.69■■□□□ 1.38
TBC1D4O60343 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TBC1D4O60343 OR2I1P-207ENST00000453522 948 ntBASIC23.69■■□□□ 1.38
TBC1D4O60343 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TBC1D4O60343 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.69■■□□□ 1.38
TBC1D4O60343 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.69■■□□□ 1.38
TBC1D4O60343 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.69■■□□□ 1.38
TBC1D4O60343 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.69■■□□□ 1.38
TBC1D4O60343 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TBC1D4O60343 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.68■■□□□ 1.38
TBC1D4O60343 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D4O60343 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
TBC1D4O60343 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D4O60343 TSPY26P-201ENST00000476365 1326 ntBASIC23.68■■□□□ 1.38
TBC1D4O60343 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.38
TBC1D4O60343 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
TBC1D4O60343 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D4O60343 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TBC1D4O60343 AC010525.1-201ENST00000585559 441 ntBASIC23.68■■□□□ 1.38
TBC1D4O60343 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D4O60343 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D4O60343 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D4O60343 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.68■■□□□ 1.38
TBC1D4O60343 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TBC1D4O60343 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.67■■□□□ 1.38
TBC1D4O60343 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TBC1D4O60343 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.67■■□□□ 1.38
TBC1D4O60343 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.67■■□□□ 1.38
TBC1D4O60343 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.67■■□□□ 1.38
TBC1D4O60343 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TBC1D4O60343 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D4O60343 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D4O60343 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D4O60343 IGHV3-19-201ENST00000521488 291 ntBASIC23.66■■□□□ 1.38
TBC1D4O60343 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.66■■□□□ 1.38
TBC1D4O60343 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D4O60343 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TBC1D4O60343 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TBC1D4O60343 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D4O60343 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D4O60343 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D4O60343 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D4O60343 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.65■■□□□ 1.38
TBC1D4O60343 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.65■■□□□ 1.38
TBC1D4O60343 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D4O60343 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.65■■□□□ 1.38
TBC1D4O60343 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.65■■□□□ 1.38
TBC1D4O60343 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TBC1D4O60343 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
TBC1D4O60343 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D4O60343 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D4O60343 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.64■■□□□ 1.38
TBC1D4O60343 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TBC1D4O60343 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TBC1D4O60343 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms