Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ID1-201ENST00000376105 1233 ntBASIC21.38■■□□□ 1.01
SLC28A2O43868 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A2O43868 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC28A2O43868 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC28A2O43868 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SLC28A2O43868 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A2O43868 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A2O43868 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SLC28A2O43868 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC28A2O43868 AL161729.1-201ENST00000604104 1402 ntBASIC21.38■■□□□ 1.01
SLC28A2O43868 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A2O43868 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A2O43868 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC28A2O43868 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A2O43868 IRS3P-201ENST00000223076 1006 ntBASIC21.37■■□□□ 1.01
SLC28A2O43868 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A2O43868 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A2O43868 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A2O43868 AC022517.1-201ENST00000592429 346 ntBASIC21.37■■□□□ 1.01
SLC28A2O43868 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC28A2O43868 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC28A2O43868 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SLC28A2O43868 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SLC28A2O43868 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SLC28A2O43868 RASA4CP-201ENST00000424092 1398 ntBASIC21.36■■□□□ 1.01
SLC28A2O43868 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC28A2O43868 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC28A2O43868 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC28A2O43868 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC28A2O43868 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC28A2O43868 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.36■■□□□ 1.01
SLC28A2O43868 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC28A2O43868 AC133561.1-201ENST00000568600 2415 ntBASIC21.36■■□□□ 1.01
SLC28A2O43868 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC28A2O43868 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A2O43868 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A2O43868 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC28A2O43868 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC28A2O43868 AL022069.1-201ENST00000568025 1636 ntBASIC21.35■■□□□ 1.01
SLC28A2O43868 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A2O43868 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
SLC28A2O43868 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC28A2O43868 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC28A2O43868 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A2O43868 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A2O43868 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC28A2O43868 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A2O43868 MIR4767-201ENST00000582827 78 ntBASIC21.34■■□□□ 1.01
SLC28A2O43868 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A2O43868 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC28A2O43868 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A2O43868 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SLC28A2O43868 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A2O43868 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC28A2O43868 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A2O43868 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A2O43868 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC28A2O43868 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A2O43868 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLC28A2O43868 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLC28A2O43868 AF131216.4-201ENST00000638924 1588 ntBASIC21.33■■□□□ 1.01
SLC28A2O43868 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A2O43868 MIR6722-201ENST00000617286 78 ntBASIC21.33■■□□□ 1.01
SLC28A2O43868 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.33■■□□□ 1.01
SLC28A2O43868 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.33■■□□□ 1
SLC28A2O43868 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC28A2O43868 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.33■■□□□ 1
SLC28A2O43868 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.33■■□□□ 1
SLC28A2O43868 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.32■■□□□ 1
SLC28A2O43868 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 AC068473.5-201ENST00000616428 2072 ntBASIC21.32■■□□□ 1
SLC28A2O43868 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
SLC28A2O43868 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.32■■□□□ 1
SLC28A2O43868 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.32■■□□□ 1
SLC28A2O43868 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SLC28A2O43868 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A2O43868 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.32■■□□□ 1
SLC28A2O43868 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.32■■□□□ 1
SLC28A2O43868 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC28A2O43868 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.31■■□□□ 1
SLC28A2O43868 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC28A2O43868 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.31■■□□□ 1
SLC28A2O43868 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.31■■□□□ 1
SLC28A2O43868 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.31■■□□□ 1
SLC28A2O43868 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC28A2O43868 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC28A2O43868 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC28A2O43868 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC28A2O43868 SYT6-210ENST00000641643 1587 ntBASIC21.31■■□□□ 1
SLC28A2O43868 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC28A2O43868 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC28A2O43868 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.3■■□□□ 1
SLC28A2O43868 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms