Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19■□□□□ 0.63
SSNA1O43805 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSNA1O43805 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SSNA1O43805 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSNA1O43805 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19■□□□□ 0.63
SSNA1O43805 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSNA1O43805 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSNA1O43805 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SSNA1O43805 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSNA1O43805 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSNA1O43805 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.99■□□□□ 0.63
SSNA1O43805 AC026310.3-201ENST00000625186 2373 ntBASIC18.99■□□□□ 0.63
SSNA1O43805 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.99■□□□□ 0.63
SSNA1O43805 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
SSNA1O43805 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSNA1O43805 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSNA1O43805 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSNA1O43805 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSNA1O43805 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SSNA1O43805 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSNA1O43805 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSNA1O43805 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SSNA1O43805 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SSNA1O43805 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSNA1O43805 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.97■□□□□ 0.63
SSNA1O43805 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SSNA1O43805 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 AC148477.6-201ENST00000623746 465 ntBASIC18.97■□□□□ 0.63
SSNA1O43805 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SSNA1O43805 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.97■□□□□ 0.63
SSNA1O43805 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSNA1O43805 RNF165-205ENST00000588679 2904 ntBASIC18.97■□□□□ 0.63
SSNA1O43805 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.97■□□□□ 0.63
SSNA1O43805 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SSNA1O43805 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.96■□□□□ 0.63
SSNA1O43805 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.96■□□□□ 0.63
SSNA1O43805 AC008813.1-201ENST00000536597 885 ntBASIC18.96■□□□□ 0.63
SSNA1O43805 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SSNA1O43805 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.96■□□□□ 0.63
SSNA1O43805 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSNA1O43805 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSNA1O43805 AC139530.1-201ENST00000575312 1977 ntBASIC18.95■□□□□ 0.62
SSNA1O43805 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SSNA1O43805 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SSNA1O43805 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.95■□□□□ 0.62
SSNA1O43805 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSNA1O43805 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSNA1O43805 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSNA1O43805 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSNA1O43805 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.95■□□□□ 0.62
SSNA1O43805 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
SSNA1O43805 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.95■□□□□ 0.62
SSNA1O43805 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSNA1O43805 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SSNA1O43805 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.95■□□□□ 0.62
SSNA1O43805 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSNA1O43805 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSNA1O43805 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSNA1O43805 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.94■□□□□ 0.62
SSNA1O43805 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSNA1O43805 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SSNA1O43805 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SSNA1O43805 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SSNA1O43805 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.94■□□□□ 0.62
SSNA1O43805 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSNA1O43805 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSNA1O43805 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.93■□□□□ 0.62
SSNA1O43805 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SSNA1O43805 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.93■□□□□ 0.62
SSNA1O43805 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms