Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAF3IP2O43734 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 AL512631.2-201ENST00000604634 923 ntBASIC19.87■□□□□ 0.77
TRAF3IP2O43734 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAF3IP2O43734 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 DUX4L4-201ENST00000566884 1269 ntBASIC19.86■□□□□ 0.77
TRAF3IP2O43734 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAF3IP2O43734 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP2O43734 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRAF3IP2O43734 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP2O43734 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP2O43734 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP2O43734 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP2O43734 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP2O43734 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP2O43734 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP2O43734 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.83■□□□□ 0.76
TRAF3IP2O43734 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms