Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHOXO15266 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHOXO15266 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SHOXO15266 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SHOXO15266 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHOXO15266 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHOXO15266 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHOXO15266 HSD17B1P1-201ENST00000590052 955 ntBASIC18.93■□□□□ 0.62
SHOXO15266 MIR6089-201ENST00000616698 64 ntBASIC18.93■□□□□ 0.62
SHOXO15266 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHOXO15266 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.93■□□□□ 0.62
SHOXO15266 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHOXO15266 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.93■□□□□ 0.62
SHOXO15266 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHOXO15266 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHOXO15266 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.93■□□□□ 0.62
SHOXO15266 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHOXO15266 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHOXO15266 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SHOXO15266 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.92■□□□□ 0.62
SHOXO15266 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHOXO15266 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SHOXO15266 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.92■□□□□ 0.62
SHOXO15266 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SHOXO15266 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.92■□□□□ 0.62
SHOXO15266 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHOXO15266 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
SHOXO15266 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SHOXO15266 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SHOXO15266 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.91■□□□□ 0.62
SHOXO15266 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SHOXO15266 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SHOXO15266 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHOXO15266 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.9■□□□□ 0.62
SHOXO15266 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHOXO15266 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SHOXO15266 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHOXO15266 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.9■□□□□ 0.62
SHOXO15266 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHOXO15266 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHOXO15266 PKD1P6-201ENST00000343738 4769 ntBASIC18.9■□□□□ 0.62
SHOXO15266 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHOXO15266 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.89■□□□□ 0.61
SHOXO15266 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHOXO15266 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHOXO15266 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHOXO15266 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHOXO15266 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.89■□□□□ 0.61
SHOXO15266 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SHOXO15266 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SHOXO15266 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.89■□□□□ 0.61
SHOXO15266 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SHOXO15266 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHOXO15266 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SHOXO15266 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.88■□□□□ 0.61
SHOXO15266 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHOXO15266 RPS2P7-201ENST00000447334 885 ntBASIC18.88■□□□□ 0.61
SHOXO15266 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.88■□□□□ 0.61
SHOXO15266 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.88■□□□□ 0.61
SHOXO15266 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHOXO15266 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SHOXO15266 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.88■□□□□ 0.61
SHOXO15266 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHOXO15266 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.87■□□□□ 0.61
SHOXO15266 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHOXO15266 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHOXO15266 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHOXO15266 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.87■□□□□ 0.61
SHOXO15266 MIR6765-201ENST00000614092 87 ntBASIC18.87■□□□□ 0.61
SHOXO15266 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHOXO15266 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.87■□□□□ 0.61
SHOXO15266 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SHOXO15266 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SHOXO15266 SPCS2P3-201ENST00000500401 656 ntBASIC18.86■□□□□ 0.61
SHOXO15266 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.86■□□□□ 0.61
SHOXO15266 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.86■□□□□ 0.61
SHOXO15266 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
SHOXO15266 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHOXO15266 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms