Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TO15178 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TO15178 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.58■□□□□ 0.88
TO15178 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.58■□□□□ 0.88
TO15178 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TO15178 DUSP8P5-201ENST00000422884 1815 ntBASIC20.57■□□□□ 0.88
TO15178 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TO15178 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TO15178 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.57■□□□□ 0.88
TO15178 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TO15178 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.57■□□□□ 0.88
TO15178 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
TO15178 AL499627.2-201ENST00000606283 725 ntBASIC20.57■□□□□ 0.88
TO15178 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TO15178 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.57■□□□□ 0.88
TO15178 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TO15178 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TO15178 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
TO15178 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TO15178 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
TO15178 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TO15178 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TO15178 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.56■□□□□ 0.88
TO15178 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.56■□□□□ 0.88
TO15178 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TO15178 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TO15178 AC006455.2-201ENST00000429931 906 ntBASIC20.56■□□□□ 0.88
TO15178 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.56■□□□□ 0.88
TO15178 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.56■□□□□ 0.88
TO15178 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TO15178 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.56■□□□□ 0.88
TO15178 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
TO15178 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TO15178 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TO15178 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TO15178 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TO15178 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TO15178 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TO15178 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TO15178 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TO15178 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TO15178 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.55■□□□□ 0.88
TO15178 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TO15178 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TO15178 AL138724.1-201ENST00000606771 1088 ntBASIC20.55■□□□□ 0.88
TO15178 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.55■□□□□ 0.88
TO15178 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.55■□□□□ 0.88
TO15178 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.55■□□□□ 0.88
TO15178 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TO15178 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TO15178 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TO15178 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.54■□□□□ 0.88
TO15178 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.54■□□□□ 0.88
TO15178 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TO15178 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TO15178 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.54■□□□□ 0.88
TO15178 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.53■□□□□ 0.88
TO15178 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.53■□□□□ 0.88
TO15178 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 SYT6-210ENST00000641643 1587 ntBASIC20.53■□□□□ 0.88
TO15178 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.53■□□□□ 0.88
TO15178 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.53■□□□□ 0.88
TO15178 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TO15178 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TO15178 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TO15178 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
TO15178 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TO15178 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.52■□□□□ 0.88
TO15178 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.52■□□□□ 0.88
TO15178 MIR3181-201ENST00000578512 73 ntBASIC20.52■□□□□ 0.88
TO15178 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.52■□□□□ 0.88
TO15178 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.52■□□□□ 0.88
TO15178 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.52■□□□□ 0.88
TO15178 pRNA.6-201ENST00000610482 90 ntBASIC20.52■□□□□ 0.88
TO15178 pRNA.5-201ENST00000612139 90 ntBASIC20.52■□□□□ 0.88
TO15178 pRNA.11-201ENST00000618423 90 ntBASIC20.52■□□□□ 0.88
TO15178 pRNA.13-201ENST00000619112 90 ntBASIC20.52■□□□□ 0.88
TO15178 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TO15178 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
TO15178 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.52■□□□□ 0.88
TO15178 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TO15178 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.52■□□□□ 0.87
TO15178 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.52■□□□□ 0.87
TO15178 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TO15178 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms