Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
CHD2O14647 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHD2O14647 NCF1B-203ENST00000435988 1254 ntBASIC31.68■■■□□ 2.66
CHD2O14647 AL109923.1-201ENST00000618799 583 ntBASIC31.68■■■□□ 2.66
CHD2O14647 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CHD2O14647 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.67■■■□□ 2.66
CHD2O14647 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.67■■■□□ 2.66
CHD2O14647 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.67■■■□□ 2.66
CHD2O14647 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHD2O14647 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD2O14647 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CHD2O14647 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.66■■■□□ 2.66
CHD2O14647 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CHD2O14647 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.66■■■□□ 2.66
CHD2O14647 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CHD2O14647 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.66■■■□□ 2.66
CHD2O14647 BID-214ENST00000617586 542 ntTSL 5 BASIC31.66■■■□□ 2.66
CHD2O14647 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD2O14647 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD2O14647 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD2O14647 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CHD2O14647 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD2O14647 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.66■■■□□ 2.66
CHD2O14647 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.66■■■□□ 2.66
CHD2O14647 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CHD2O14647 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.65■■■□□ 2.66
CHD2O14647 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.65■■■□□ 2.66
CHD2O14647 AC004854.2-201ENST00000608450 1441 ntBASIC31.65■■■□□ 2.66
CHD2O14647 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD2O14647 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.65■■■□□ 2.66
CHD2O14647 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD2O14647 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC31.65■■■□□ 2.66
CHD2O14647 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CHD2O14647 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.64■■■□□ 2.66
CHD2O14647 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
CHD2O14647 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CHD2O14647 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CHD2O14647 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CHD2O14647 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CHD2O14647 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC31.63■■■□□ 2.65
CHD2O14647 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.63■■■□□ 2.65
CHD2O14647 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.63■■■□□ 2.65
CHD2O14647 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.63■■■□□ 2.65
CHD2O14647 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHD2O14647 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31.63■■■□□ 2.65
CHD2O14647 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.63■■■□□ 2.65
CHD2O14647 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC31.63■■■□□ 2.65
CHD2O14647 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31.62■■■□□ 2.65
CHD2O14647 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHD2O14647 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHD2O14647 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHD2O14647 AC006970.2-201ENST00000450065 779 ntBASIC31.62■■■□□ 2.65
CHD2O14647 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.62■■■□□ 2.65
CHD2O14647 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CHD2O14647 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHD2O14647 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHD2O14647 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CHD2O14647 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CHD2O14647 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CHD2O14647 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.61■■■□□ 2.65
CHD2O14647 AC066615.1-201ENST00000640911 628 ntBASIC31.61■■■□□ 2.65
CHD2O14647 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHD2O14647 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHD2O14647 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHD2O14647 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHD2O14647 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHD2O14647 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
CHD2O14647 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHD2O14647 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.59■■■□□ 2.65
CHD2O14647 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHD2O14647 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.59■■■□□ 2.65
CHD2O14647 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHD2O14647 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHD2O14647 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHD2O14647 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHD2O14647 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHD2O14647 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.58■■■□□ 2.65
CHD2O14647 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
CHD2O14647 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHD2O14647 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHD2O14647 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.58■■■□□ 2.65
CHD2O14647 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHD2O14647 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHD2O14647 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.57■■■□□ 2.65
CHD2O14647 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHD2O14647 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.57■■■□□ 2.64
CHD2O14647 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHD2O14647 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.57■■■□□ 2.64
CHD2O14647 TMEM191A-211ENST00000637163 1067 ntBASIC31.56■■■□□ 2.64
CHD2O14647 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.56■■■□□ 2.64
CHD2O14647 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.56■■■□□ 2.64
CHD2O14647 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CHD2O14647 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
CHD2O14647 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
CHD2O14647 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHD2O14647 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHD2O14647 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHD2O14647 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.55■■■□□ 2.64
CHD2O14647 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHD2O14647 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms