Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDX4O14627 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDX4O14627 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.86■■□□□ 1.09
CDX4O14627 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.86■■□□□ 1.09
CDX4O14627 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDX4O14627 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDX4O14627 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDX4O14627 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CDX4O14627 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CDX4O14627 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CDX4O14627 AP004607.4-201ENST00000530158 1459 ntBASIC21.85■■□□□ 1.09
CDX4O14627 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.85■■□□□ 1.09
CDX4O14627 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.85■■□□□ 1.09
CDX4O14627 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDX4O14627 AC006970.2-201ENST00000450065 779 ntBASIC21.85■■□□□ 1.09
CDX4O14627 BID-214ENST00000617586 542 ntTSL 5 BASIC21.85■■□□□ 1.09
CDX4O14627 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CDX4O14627 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.85■■□□□ 1.09
CDX4O14627 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CDX4O14627 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.84■■□□□ 1.09
CDX4O14627 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.84■■□□□ 1.09
CDX4O14627 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDX4O14627 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.84■■□□□ 1.09
CDX4O14627 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.84■■□□□ 1.09
CDX4O14627 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDX4O14627 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDX4O14627 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.84■■□□□ 1.09
CDX4O14627 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDX4O14627 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDX4O14627 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.84■■□□□ 1.09
CDX4O14627 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDX4O14627 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.83■■□□□ 1.09
CDX4O14627 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.83■■□□□ 1.09
CDX4O14627 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDX4O14627 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDX4O14627 NCF1B-203ENST00000435988 1254 ntBASIC21.83■■□□□ 1.09
CDX4O14627 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.83■■□□□ 1.09
CDX4O14627 TPRG1LP1-201ENST00000598702 760 ntBASIC21.83■■□□□ 1.09
CDX4O14627 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.83■■□□□ 1.09
CDX4O14627 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.82■■□□□ 1.08
CDX4O14627 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.82■■□□□ 1.08
CDX4O14627 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.82■■□□□ 1.08
CDX4O14627 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDX4O14627 HLA-L-211ENST00000482052 1765 ntBASIC21.82■■□□□ 1.08
CDX4O14627 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDX4O14627 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CDX4O14627 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.81■■□□□ 1.08
CDX4O14627 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.81■■□□□ 1.08
CDX4O14627 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.81■■□□□ 1.08
CDX4O14627 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDX4O14627 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDX4O14627 AC004854.2-201ENST00000608450 1441 ntBASIC21.8■■□□□ 1.08
CDX4O14627 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDX4O14627 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDX4O14627 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDX4O14627 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.8■■□□□ 1.08
CDX4O14627 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDX4O14627 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.8■■□□□ 1.08
CDX4O14627 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDX4O14627 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDX4O14627 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDX4O14627 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.79■■□□□ 1.08
CDX4O14627 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.79■■□□□ 1.08
CDX4O14627 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.79■■□□□ 1.08
CDX4O14627 AC066615.1-201ENST00000640911 628 ntBASIC21.79■■□□□ 1.08
CDX4O14627 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.79■■□□□ 1.08
CDX4O14627 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDX4O14627 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.79■■□□□ 1.08
CDX4O14627 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDX4O14627 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CDX4O14627 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDX4O14627 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDX4O14627 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.78■■□□□ 1.08
CDX4O14627 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.78■■□□□ 1.08
CDX4O14627 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.78■■□□□ 1.08
CDX4O14627 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms