Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.99■□□□□ 0.95
CLDN4O14493 AL353803.4-201ENST00000565882 1934 ntBASIC20.99■□□□□ 0.95
CLDN4O14493 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN4O14493 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLDN4O14493 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN4O14493 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN4O14493 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN4O14493 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLDN4O14493 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDN4O14493 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN4O14493 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN4O14493 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
CLDN4O14493 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDN4O14493 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDN4O14493 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDN4O14493 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN4O14493 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CLDN4O14493 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN4O14493 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CLDN4O14493 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN4O14493 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN4O14493 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN4O14493 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN4O14493 AL138724.1-201ENST00000606771 1088 ntBASIC20.97■□□□□ 0.95
CLDN4O14493 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN4O14493 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN4O14493 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLDN4O14493 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDN4O14493 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLDN4O14493 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.96■□□□□ 0.95
CLDN4O14493 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLDN4O14493 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CLDN4O14493 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN4O14493 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN4O14493 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
CLDN4O14493 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN4O14493 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CLDN4O14493 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLDN4O14493 UNC93B3-201ENST00000308076 687 ntBASIC20.95■□□□□ 0.94
CLDN4O14493 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN4O14493 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLDN4O14493 AC006455.2-201ENST00000429931 906 ntBASIC20.95■□□□□ 0.94
CLDN4O14493 AC096631.2-201ENST00000436136 790 ntBASIC20.95■□□□□ 0.94
CLDN4O14493 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN4O14493 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN4O14493 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN4O14493 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN4O14493 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN4O14493 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.95■□□□□ 0.94
CLDN4O14493 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN4O14493 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN4O14493 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN4O14493 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN4O14493 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN4O14493 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN4O14493 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN4O14493 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN4O14493 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CLDN4O14493 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN4O14493 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN4O14493 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.94■□□□□ 0.94
CLDN4O14493 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN4O14493 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLDN4O14493 pRNA.6-201ENST00000610482 90 ntBASIC20.94■□□□□ 0.94
CLDN4O14493 pRNA.5-201ENST00000612139 90 ntBASIC20.94■□□□□ 0.94
CLDN4O14493 pRNA.11-201ENST00000618423 90 ntBASIC20.94■□□□□ 0.94
CLDN4O14493 pRNA.13-201ENST00000619112 90 ntBASIC20.94■□□□□ 0.94
CLDN4O14493 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN4O14493 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN4O14493 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLDN4O14493 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLDN4O14493 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
CLDN4O14493 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN4O14493 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLDN4O14493 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN4O14493 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN4O14493 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN4O14493 SERBP1P1-201ENST00000396021 1160 ntBASIC20.93■□□□□ 0.94
CLDN4O14493 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN4O14493 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN4O14493 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN4O14493 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN4O14493 MIR3181-201ENST00000578512 73 ntBASIC20.93■□□□□ 0.94
CLDN4O14493 AL499627.2-201ENST00000606283 725 ntBASIC20.93■□□□□ 0.94
CLDN4O14493 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN4O14493 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLDN4O14493 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLDN4O14493 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CLDN4O14493 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms