Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC1O00299 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC1O00299 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.02■□□□□ 0.96
CLIC1O00299 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC1O00299 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC1O00299 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC1O00299 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.02■□□□□ 0.96
CLIC1O00299 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.02■□□□□ 0.96
CLIC1O00299 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC1O00299 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLIC1O00299 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLIC1O00299 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CLIC1O00299 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLIC1O00299 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC1O00299 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.01■□□□□ 0.95
CLIC1O00299 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC1O00299 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.01■□□□□ 0.95
CLIC1O00299 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.01■□□□□ 0.95
CLIC1O00299 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC1O00299 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CLIC1O00299 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.01■□□□□ 0.95
CLIC1O00299 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CLIC1O00299 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC1O00299 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CLIC1O00299 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC1O00299 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC1O00299 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21■□□□□ 0.95
CLIC1O00299 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21■□□□□ 0.95
CLIC1O00299 SNX5-217ENST00000606557 1087 ntBASIC21■□□□□ 0.95
CLIC1O00299 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21■□□□□ 0.95
CLIC1O00299 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLIC1O00299 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC1O00299 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLIC1O00299 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.99■□□□□ 0.95
CLIC1O00299 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLIC1O00299 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLIC1O00299 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLIC1O00299 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.99■□□□□ 0.95
CLIC1O00299 AC103834.1-201ENST00000520383 144 ntBASIC20.99■□□□□ 0.95
CLIC1O00299 AC012354.3-201ENST00000623734 483 ntBASIC20.99■□□□□ 0.95
CLIC1O00299 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.99■□□□□ 0.95
CLIC1O00299 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC1O00299 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.98■□□□□ 0.95
CLIC1O00299 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CLIC1O00299 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 AC144652.1-201ENST00000609974 1624 ntBASIC20.98■□□□□ 0.95
CLIC1O00299 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.98■□□□□ 0.95
CLIC1O00299 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.98■□□□□ 0.95
CLIC1O00299 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC1O00299 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC1O00299 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.97■□□□□ 0.95
CLIC1O00299 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC1O00299 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC1O00299 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC1O00299 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLIC1O00299 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CLIC1O00299 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC1O00299 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.97■□□□□ 0.95
CLIC1O00299 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.97■□□□□ 0.95
CLIC1O00299 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CLIC1O00299 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLIC1O00299 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC1O00299 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC1O00299 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CLIC1O00299 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC1O00299 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC1O00299 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.96■□□□□ 0.95
CLIC1O00299 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC1O00299 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms