Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.15■■□□□ 1.62
DDX39AO00148 MIR939-201ENST00000401314 82 ntBASIC25.15■■□□□ 1.62
DDX39AO00148 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX39AO00148 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX39AO00148 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX39AO00148 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX39AO00148 FP325331.1-202ENST00000623531 1380 ntBASIC25.15■■□□□ 1.62
DDX39AO00148 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.15■■□□□ 1.62
DDX39AO00148 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX39AO00148 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
DDX39AO00148 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX39AO00148 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX39AO00148 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX39AO00148 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX39AO00148 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX39AO00148 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.14■■□□□ 1.62
DDX39AO00148 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.14■■□□□ 1.62
DDX39AO00148 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
DDX39AO00148 DUX4L4-201ENST00000566884 1269 ntBASIC25.14■■□□□ 1.62
DDX39AO00148 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
DDX39AO00148 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX39AO00148 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX39AO00148 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX39AO00148 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX39AO00148 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
DDX39AO00148 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX39AO00148 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX39AO00148 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
DDX39AO00148 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 ZNRF2P3-201ENST00000424200 374 ntBASIC25.13■■□□□ 1.61
DDX39AO00148 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.13■■□□□ 1.61
DDX39AO00148 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.13■■□□□ 1.61
DDX39AO00148 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX39AO00148 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
DDX39AO00148 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX39AO00148 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.12■■□□□ 1.61
DDX39AO00148 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
DDX39AO00148 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX39AO00148 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX39AO00148 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
DDX39AO00148 MIR935-201ENST00000401179 91 ntBASIC25.12■■□□□ 1.61
DDX39AO00148 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.12■■□□□ 1.61
DDX39AO00148 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.12■■□□□ 1.61
DDX39AO00148 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.12■■□□□ 1.61
DDX39AO00148 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
DDX39AO00148 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX39AO00148 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX39AO00148 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
DDX39AO00148 AC133637.1-201ENST00000624115 1537 ntBASIC25.12■■□□□ 1.61
DDX39AO00148 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX39AO00148 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
DDX39AO00148 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.11■■□□□ 1.61
DDX39AO00148 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX39AO00148 AC099791.1-201ENST00000416440 715 ntBASIC25.11■■□□□ 1.61
DDX39AO00148 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX39AO00148 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX39AO00148 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX39AO00148 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX39AO00148 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX39AO00148 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX39AO00148 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX39AO00148 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
DDX39AO00148 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX39AO00148 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.1■■□□□ 1.61
DDX39AO00148 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX39AO00148 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.1■■□□□ 1.61
DDX39AO00148 AC105265.2-201ENST00000467189 838 ntBASIC25.1■■□□□ 1.61
DDX39AO00148 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX39AO00148 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX39AO00148 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX39AO00148 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX39AO00148 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX39AO00148 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX39AO00148 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
DDX39AO00148 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX39AO00148 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
DDX39AO00148 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX39AO00148 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX39AO00148 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX39AO00148 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX39AO00148 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.09■■□□□ 1.61
DDX39AO00148 AL353803.4-201ENST00000565882 1934 ntBASIC25.09■■□□□ 1.61
DDX39AO00148 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX39AO00148 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX39AO00148 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX39AO00148 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX39AO00148 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX39AO00148 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.08■■□□□ 1.61
DDX39AO00148 AC091305.1-201ENST00000479476 895 ntBASIC25.08■■□□□ 1.61
DDX39AO00148 AC027682.1-201ENST00000562846 899 ntBASIC25.08■■□□□ 1.61
DDX39AO00148 AL499627.2-201ENST00000606283 725 ntBASIC25.08■■□□□ 1.61
DDX39AO00148 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
DDX39AO00148 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms