Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00473A8K010 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00473A8K010 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00473A8K010 ECEL1P1-201ENST00000373592 1742 ntBASIC18.18■□□□□ 0.5
LINC00473A8K010 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LINC00473A8K010 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00473A8K010 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00473A8K010 AC144652.1-201ENST00000609974 1624 ntBASIC18.17■□□□□ 0.5
LINC00473A8K010 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00473A8K010 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.17■□□□□ 0.5
LINC00473A8K010 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00473A8K010 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC00473A8K010 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC00473A8K010 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00473A8K010 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00473A8K010 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LINC00473A8K010 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00473A8K010 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00473A8K010 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00473A8K010 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00473A8K010 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00473A8K010 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00473A8K010 ESRRAP2-201ENST00000418437 1549 ntBASIC18.16■□□□□ 0.5
LINC00473A8K010 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00473A8K010 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00473A8K010 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00473A8K010 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00473A8K010 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC00473A8K010 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00473A8K010 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00473A8K010 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00473A8K010 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00473A8K010 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00473A8K010 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LINC00473A8K010 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00473A8K010 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LINC00473A8K010 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00473A8K010 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00473A8K010 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00473A8K010 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00473A8K010 AC021242.3-201ENST00000607598 1377 ntBASIC18.15■□□□□ 0.5
LINC00473A8K010 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LINC00473A8K010 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
LINC00473A8K010 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00473A8K010 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00473A8K010 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.14■□□□□ 0.49
LINC00473A8K010 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.14■□□□□ 0.49
LINC00473A8K010 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00473A8K010 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LINC00473A8K010 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
LINC00473A8K010 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00473A8K010 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00473A8K010 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00473A8K010 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LINC00473A8K010 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00473A8K010 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LINC00473A8K010 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 AC242852.2-201ENST00000615738 1807 ntBASIC18.12■□□□□ 0.49
LINC00473A8K010 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LINC00473A8K010 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LINC00473A8K010 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 MIR6722-201ENST00000617286 78 ntBASIC18.12■□□□□ 0.49
LINC00473A8K010 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 CLDN5-201ENST00000403084 2357 ntBASIC18.12■□□□□ 0.49
LINC00473A8K010 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00473A8K010 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00473A8K010 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LINC00473A8K010 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00473A8K010 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LINC00473A8K010 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00473A8K010 BX664725.1-201ENST00000438252 379 ntBASIC18.11■□□□□ 0.49
LINC00473A8K010 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00473A8K010 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms