Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM4A7MD48 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM4A7MD48 AC009299.2-201ENST00000482477 511 ntBASIC17.97■□□□□ 0.47
SRRM4A7MD48 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.97■□□□□ 0.47
SRRM4A7MD48 AL451085.2-201ENST00000605085 799 ntBASIC17.97■□□□□ 0.47
SRRM4A7MD48 AC079834.2-201ENST00000609776 1949 ntBASIC17.97■□□□□ 0.47
SRRM4A7MD48 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM4A7MD48 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM4A7MD48 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM4A7MD48 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM4A7MD48 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM4A7MD48 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM4A7MD48 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SRRM4A7MD48 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SRRM4A7MD48 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM4A7MD48 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.96■□□□□ 0.47
SRRM4A7MD48 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM4A7MD48 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.96■□□□□ 0.47
SRRM4A7MD48 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.96■□□□□ 0.47
SRRM4A7MD48 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM4A7MD48 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SRRM4A7MD48 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.95■□□□□ 0.46
SRRM4A7MD48 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SRRM4A7MD48 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SRRM4A7MD48 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM4A7MD48 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SRRM4A7MD48 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SRRM4A7MD48 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM4A7MD48 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.94■□□□□ 0.46
SRRM4A7MD48 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.94■□□□□ 0.46
SRRM4A7MD48 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM4A7MD48 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.94■□□□□ 0.46
SRRM4A7MD48 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM4A7MD48 EP400NL-214ENST00000641289 2402 ntBASIC17.94■□□□□ 0.46
SRRM4A7MD48 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.94■□□□□ 0.46
SRRM4A7MD48 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.94■□□□□ 0.46
SRRM4A7MD48 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SRRM4A7MD48 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM4A7MD48 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM4A7MD48 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM4A7MD48 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SRRM4A7MD48 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.93■□□□□ 0.46
SRRM4A7MD48 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.93■□□□□ 0.46
SRRM4A7MD48 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.93■□□□□ 0.46
SRRM4A7MD48 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM4A7MD48 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM4A7MD48 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM4A7MD48 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM4A7MD48 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SRRM4A7MD48 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM4A7MD48 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SRRM4A7MD48 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM4A7MD48 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM4A7MD48 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM4A7MD48 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM4A7MD48 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM4A7MD48 MTDHP2-201ENST00000601468 714 ntBASIC17.92■□□□□ 0.46
SRRM4A7MD48 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SRRM4A7MD48 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM4A7MD48 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM4A7MD48 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SRRM4A7MD48 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SRRM4A7MD48 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM4A7MD48 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM4A7MD48 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM4A7MD48 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SRRM4A7MD48 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM4A7MD48 TSPY9P-201ENST00000440215 945 ntBASIC17.91■□□□□ 0.46
SRRM4A7MD48 TSPY11P-201ENST00000442607 1045 ntBASIC17.91■□□□□ 0.46
SRRM4A7MD48 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.91■□□□□ 0.46
SRRM4A7MD48 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SRRM4A7MD48 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM4A7MD48 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.91■□□□□ 0.46
SRRM4A7MD48 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.9■□□□□ 0.46
SRRM4A7MD48 GUSBP5-202ENST00000510805 1989 ntBASIC17.9■□□□□ 0.46
SRRM4A7MD48 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.9■□□□□ 0.46
SRRM4A7MD48 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms