Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 MIR3181-201ENST00000578512 73 ntBASIC17.64■□□□□ 0.41
LINC01548A6NM66 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LINC01548A6NM66 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01548A6NM66 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
LINC01548A6NM66 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01548A6NM66 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01548A6NM66 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01548A6NM66 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LINC01548A6NM66 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.63■□□□□ 0.41
LINC01548A6NM66 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01548A6NM66 pRNA.6-201ENST00000610482 90 ntBASIC17.63■□□□□ 0.41
LINC01548A6NM66 pRNA.5-201ENST00000612139 90 ntBASIC17.63■□□□□ 0.41
LINC01548A6NM66 pRNA.11-201ENST00000618423 90 ntBASIC17.63■□□□□ 0.41
LINC01548A6NM66 pRNA.13-201ENST00000619112 90 ntBASIC17.63■□□□□ 0.41
LINC01548A6NM66 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LINC01548A6NM66 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01548A6NM66 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
LINC01548A6NM66 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01548A6NM66 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01548A6NM66 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LINC01548A6NM66 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 DUX4L19-201ENST00000557448 1267 ntBASIC17.62■□□□□ 0.41
LINC01548A6NM66 AC092171.4-201ENST00000609130 632 ntBASIC17.62■□□□□ 0.41
LINC01548A6NM66 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01548A6NM66 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LINC01548A6NM66 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.62■□□□□ 0.41
LINC01548A6NM66 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01548A6NM66 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01548A6NM66 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.61■□□□□ 0.41
LINC01548A6NM66 DUX4L4-201ENST00000566884 1269 ntBASIC17.61■□□□□ 0.41
LINC01548A6NM66 AC106739.1-201ENST00000617035 715 ntBASIC17.61■□□□□ 0.41
LINC01548A6NM66 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01548A6NM66 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01548A6NM66 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01548A6NM66 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 AC135279.3-201ENST00000610945 1311 ntBASIC17.6■□□□□ 0.41
LINC01548A6NM66 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01548A6NM66 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 AC092068.2-201ENST00000590491 1708 ntBASIC17.6■□□□□ 0.41
LINC01548A6NM66 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LINC01548A6NM66 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01548A6NM66 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01548A6NM66 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01548A6NM66 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01548A6NM66 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01548A6NM66 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 MIR638-201ENST00000385237 100 ntBASIC17.59■□□□□ 0.41
LINC01548A6NM66 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01548A6NM66 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01548A6NM66 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LINC01548A6NM66 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01548A6NM66 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01548A6NM66 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.58■□□□□ 0.41
LINC01548A6NM66 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01548A6NM66 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
LINC01548A6NM66 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01548A6NM66 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LINC01548A6NM66 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LINC01548A6NM66 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01548A6NM66 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC01548A6NM66 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01548A6NM66 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01548A6NM66 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC01548A6NM66 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.57■□□□□ 0.4
LINC01548A6NM66 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01548A6NM66 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms