Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM88BA6NKF7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.46■■□□□ 1.83
TMEM88BA6NKF7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
TMEM88BA6NKF7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.46■■□□□ 1.83
TMEM88BA6NKF7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TMEM88BA6NKF7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.46■■□□□ 1.83
TMEM88BA6NKF7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TMEM88BA6NKF7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TMEM88BA6NKF7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TMEM88BA6NKF7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.45■■□□□ 1.82
TMEM88BA6NKF7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.45■■□□□ 1.82
TMEM88BA6NKF7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.45■■□□□ 1.82
TMEM88BA6NKF7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 SLC29A4P1-201ENST00000398760 971 ntBASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 ITM2C-210ENST00000620962 501 ntBASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM88BA6NKF7 ERN1-208ENST00000606895 2068 ntBASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM88BA6NKF7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.42■■□□□ 1.82
TMEM88BA6NKF7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.42■■□□□ 1.82
TMEM88BA6NKF7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TMEM88BA6NKF7 POU5F1P3-201ENST00000428824 1078 ntBASIC26.42■■□□□ 1.82
TMEM88BA6NKF7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.42■■□□□ 1.82
TMEM88BA6NKF7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.42■■□□□ 1.82
TMEM88BA6NKF7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 KRT18P29-201ENST00000397031 1267 ntBASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 MFSD11-216ENST00000590393 1141 ntBASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM88BA6NKF7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
TMEM88BA6NKF7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 AC133041.1-202ENST00000642053 222 ntBASIC26.39■■□□□ 1.82
TMEM88BA6NKF7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TMEM88BA6NKF7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TMEM88BA6NKF7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
TMEM88BA6NKF7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
TMEM88BA6NKF7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TMEM88BA6NKF7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
TMEM88BA6NKF7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms