Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC092666.2-201ENST00000613287 246 ntBASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 AC004812.2-201ENST00000611079 2094 ntBASIC19.79■□□□□ 0.76
MBD3L4A6NDZ8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MBD3L4A6NDZ8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3L4A6NDZ8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3L4A6NDZ8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
MBD3L4A6NDZ8 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.78■□□□□ 0.76
MBD3L4A6NDZ8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MBD3L4A6NDZ8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3L4A6NDZ8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L4A6NDZ8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3L4A6NDZ8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 AC010525.1-201ENST00000585559 441 ntBASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 AC087623.3-201ENST00000607047 1098 ntBASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3L4A6NDZ8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD3L4A6NDZ8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 MIR572-201ENST00000384983 95 ntBASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 AC104564.3-201ENST00000582367 638 ntBASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.73■□□□□ 0.75
MBD3L4A6NDZ8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 AC079630.1-202ENST00000618127 1840 ntBASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 AP005435.1-201ENST00000529293 1178 ntBASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 AL358852.1-201ENST00000623174 1268 ntBASIC19.72■□□□□ 0.75
MBD3L4A6NDZ8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD3L4A6NDZ8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms