Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.25■■□□□ 1.15
CCDC189A1A4V9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC189A1A4V9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC189A1A4V9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC189A1A4V9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CCDC189A1A4V9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC189A1A4V9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CCDC189A1A4V9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
CCDC189A1A4V9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC189A1A4V9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CCDC189A1A4V9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC189A1A4V9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC189A1A4V9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC189A1A4V9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CCDC189A1A4V9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC189A1A4V9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC189A1A4V9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC189A1A4V9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC189A1A4V9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC189A1A4V9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CCDC189A1A4V9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC189A1A4V9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.17■■□□□ 1.14
CCDC189A1A4V9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 AC073130.3-201ENST00000624389 2278 ntBASIC22.16■■□□□ 1.14
CCDC189A1A4V9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC189A1A4V9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCDC189A1A4V9 YBX1P4-201ENST00000392794 808 ntBASIC22.15■■□□□ 1.14
CCDC189A1A4V9 AC103834.1-201ENST00000520383 144 ntBASIC22.15■■□□□ 1.14
CCDC189A1A4V9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms