Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SMIM28A0A1B0GU29 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMIM28A0A1B0GU29 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.08■■□□□ 1.45
SMIM28A0A1B0GU29 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.08■■□□□ 1.45
SMIM28A0A1B0GU29 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMIM28A0A1B0GU29 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.08■■□□□ 1.45
SMIM28A0A1B0GU29 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMIM28A0A1B0GU29 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.08■■□□□ 1.45
SMIM28A0A1B0GU29 SLC47A1P1-202ENST00000449666 945 ntBASIC24.08■■□□□ 1.45
SMIM28A0A1B0GU29 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.44
SMIM28A0A1B0GU29 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SMIM28A0A1B0GU29 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
SMIM28A0A1B0GU29 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMIM28A0A1B0GU29 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMIM28A0A1B0GU29 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMIM28A0A1B0GU29 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMIM28A0A1B0GU29 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
SMIM28A0A1B0GU29 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
SMIM28A0A1B0GU29 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
SMIM28A0A1B0GU29 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMIM28A0A1B0GU29 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SMIM28A0A1B0GU29 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.04■■□□□ 1.44
SMIM28A0A1B0GU29 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMIM28A0A1B0GU29 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.04■■□□□ 1.44
SMIM28A0A1B0GU29 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMIM28A0A1B0GU29 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMIM28A0A1B0GU29 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SMIM28A0A1B0GU29 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SMIM28A0A1B0GU29 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMIM28A0A1B0GU29 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMIM28A0A1B0GU29 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SMIM28A0A1B0GU29 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMIM28A0A1B0GU29 AL353803.4-201ENST00000565882 1934 ntBASIC24.02■■□□□ 1.44
SMIM28A0A1B0GU29 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.02■■□□□ 1.44
SMIM28A0A1B0GU29 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.02■■□□□ 1.44
SMIM28A0A1B0GU29 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.02■■□□□ 1.44
SMIM28A0A1B0GU29 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMIM28A0A1B0GU29 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMIM28A0A1B0GU29 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.01■■□□□ 1.43
SMIM28A0A1B0GU29 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMIM28A0A1B0GU29 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.01■■□□□ 1.43
SMIM28A0A1B0GU29 AC126544.1-201ENST00000580842 1059 ntBASIC24.01■■□□□ 1.43
SMIM28A0A1B0GU29 AC010525.1-201ENST00000585559 441 ntBASIC24.01■■□□□ 1.43
SMIM28A0A1B0GU29 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
SMIM28A0A1B0GU29 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMIM28A0A1B0GU29 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMIM28A0A1B0GU29 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMIM28A0A1B0GU29 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMIM28A0A1B0GU29 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24■■□□□ 1.43
SMIM28A0A1B0GU29 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24■■□□□ 1.43
SMIM28A0A1B0GU29 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24■■□□□ 1.43
SMIM28A0A1B0GU29 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24■■□□□ 1.43
SMIM28A0A1B0GU29 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SMIM28A0A1B0GU29 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 OR2I1P-207ENST00000453522 948 ntBASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.99■■□□□ 1.43
SMIM28A0A1B0GU29 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms