Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ECEL1P1-201ENST00000373592 1742 ntBASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 KRT8P33-201ENST00000508125 1423 ntBASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC127496.7-201ENST00000625110 1798 ntBASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV10-1A0A0K0K1A3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 BX664725.1-201ENST00000438252 379 ntBASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC242852.2-201ENST00000615738 1807 ntBASIC15.73■□□□□ 0.11
TRBV10-1A0A0K0K1A3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC021242.3-201ENST00000607598 1377 ntBASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 FP325331.1-202ENST00000623531 1380 ntBASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV10-1A0A0K0K1A3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 LINC00526-201ENST00000581067 1875 ntBASIC15.71■□□□□ 0.11
TRBV10-1A0A0K0K1A3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV10-1A0A0K0K1A3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.71■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV10-1A0A0K0K1A3 LINC01529-204ENST00000636474 1715 ntBASIC15.7■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRBV10-1A0A0K0K1A3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV10-1A0A0K0K1A3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms