Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
LOC102724428A0A0B4J2F2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
LOC102724428A0A0B4J2F2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
LOC102724428A0A0B4J2F2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.84■■■□□ 2.21
LOC102724428A0A0B4J2F2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.84■■■□□ 2.21
LOC102724428A0A0B4J2F2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC28.84■■■□□ 2.21
LOC102724428A0A0B4J2F2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
LOC102724428A0A0B4J2F2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
LOC102724428A0A0B4J2F2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
LOC102724428A0A0B4J2F2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
LOC102724428A0A0B4J2F2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
LOC102724428A0A0B4J2F2 DUX4L4-201ENST00000566884 1269 ntBASIC28.83■■■□□ 2.21
LOC102724428A0A0B4J2F2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
LOC102724428A0A0B4J2F2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
LOC102724428A0A0B4J2F2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
LOC102724428A0A0B4J2F2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
LOC102724428A0A0B4J2F2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
LOC102724428A0A0B4J2F2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC28.82■■■□□ 2.2
LOC102724428A0A0B4J2F2 AC105233.4-201ENST00000642045 216 ntBASIC28.82■■■□□ 2.2
LOC102724428A0A0B4J2F2 FP325331.1-202ENST00000623531 1380 ntBASIC28.82■■■□□ 2.2
LOC102724428A0A0B4J2F2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.82■■■□□ 2.2
LOC102724428A0A0B4J2F2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC28.81■■■□□ 2.2
LOC102724428A0A0B4J2F2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.81■■■□□ 2.2
LOC102724428A0A0B4J2F2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LOC102724428A0A0B4J2F2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LOC102724428A0A0B4J2F2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.81■■■□□ 2.2
LOC102724428A0A0B4J2F2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.81■■■□□ 2.2
LOC102724428A0A0B4J2F2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 AC006015.1-201ENST00000429970 570 ntBASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 AC080038.1-201ENST00000611274 1154 ntBASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
LOC102724428A0A0B4J2F2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 RAP2CP1-201ENST00000605103 478 ntBASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
LOC102724428A0A0B4J2F2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LOC102724428A0A0B4J2F2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
LOC102724428A0A0B4J2F2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
LOC102724428A0A0B4J2F2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC28.77■■■□□ 2.2
LOC102724428A0A0B4J2F2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
LOC102724428A0A0B4J2F2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
LOC102724428A0A0B4J2F2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.76■■■□□ 2.19
LOC102724428A0A0B4J2F2 AC135731.1-201ENST00000569415 2548 ntBASIC28.76■■■□□ 2.19
LOC102724428A0A0B4J2F2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.76■■■□□ 2.19
LOC102724428A0A0B4J2F2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.76■■■□□ 2.19
LOC102724428A0A0B4J2F2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC28.76■■■□□ 2.19
LOC102724428A0A0B4J2F2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.76■■■□□ 2.19
LOC102724428A0A0B4J2F2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
LOC102724428A0A0B4J2F2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
LOC102724428A0A0B4J2F2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.75■■■□□ 2.19
LOC102724428A0A0B4J2F2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC28.75■■■□□ 2.19
LOC102724428A0A0B4J2F2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC28.75■■■□□ 2.19
LOC102724428A0A0B4J2F2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
LOC102724428A0A0B4J2F2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
LOC102724428A0A0B4J2F2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
LOC102724428A0A0B4J2F2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
LOC102724428A0A0B4J2F2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.74■■■□□ 2.19
LOC102724428A0A0B4J2F2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
LOC102724428A0A0B4J2F2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 CDCA4P2-201ENST00000441182 718 ntBASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
LOC102724428A0A0B4J2F2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.72■■■□□ 2.19
LOC102724428A0A0B4J2F2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
LOC102724428A0A0B4J2F2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
LOC102724428A0A0B4J2F2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
LOC102724428A0A0B4J2F2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
LOC102724428A0A0B4J2F2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
LOC102724428A0A0B4J2F2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
LOC102724428A0A0B4J2F2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms