Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV20A0A0B4J274 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 ZNRF2P3-201ENST00000424200 374 ntBASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV20A0A0B4J274 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 AL138724.1-201ENST00000606771 1088 ntBASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 AC241377.3-202ENST00000626088 1088 ntBASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 AC241585.3-202ENST00000628937 1088 ntBASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 AC245100.8-202ENST00000629247 1058 ntBASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV20A0A0B4J274 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 AF213884.3-201ENST00000563833 479 ntBASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 AC099791.2-201ENST00000605725 427 ntBASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 AC009102.2-201ENST00000606772 1639 ntBASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV20A0A0B4J274 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRAV20A0A0B4J274 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV20A0A0B4J274 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV20A0A0B4J274 AC091305.1-201ENST00000479476 895 ntBASIC18.77■□□□□ 0.6
TRAV20A0A0B4J274 AL136967.2-201ENST00000623968 743 ntBASIC18.77■□□□□ 0.6
TRAV20A0A0B4J274 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV20A0A0B4J274 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV20A0A0B4J274 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV20A0A0B4J274 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV20A0A0B4J274 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
TRAV20A0A0B4J274 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV20A0A0B4J274 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 MIR939-201ENST00000401314 82 ntBASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 AC011298.3-201ENST00000615796 283 ntBASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV20A0A0B4J274 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRAV20A0A0B4J274 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms