Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TRGV5A0A0B4J1U4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.09■□□□□ 0.81
TRGV5A0A0B4J1U4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.08■□□□□ 0.81
TRGV5A0A0B4J1U4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRGV5A0A0B4J1U4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRGV5A0A0B4J1U4 AC026271.2-201ENST00000428091 497 ntBASIC20.08■□□□□ 0.81
TRGV5A0A0B4J1U4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRGV5A0A0B4J1U4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.08■□□□□ 0.81
TRGV5A0A0B4J1U4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRGV5A0A0B4J1U4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.08■□□□□ 0.8
TRGV5A0A0B4J1U4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRGV5A0A0B4J1U4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRGV5A0A0B4J1U4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRGV5A0A0B4J1U4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.07■□□□□ 0.8
TRGV5A0A0B4J1U4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 OR2I1P-207ENST00000453522 948 ntBASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.06■□□□□ 0.8
TRGV5A0A0B4J1U4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRGV5A0A0B4J1U4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRGV5A0A0B4J1U4 TSPY26P-201ENST00000476365 1326 ntBASIC20.05■□□□□ 0.8
TRGV5A0A0B4J1U4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRGV5A0A0B4J1U4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRGV5A0A0B4J1U4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRGV5A0A0B4J1U4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRGV5A0A0B4J1U4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRGV5A0A0B4J1U4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 AC079630.1-202ENST00000618127 1840 ntBASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 MIR5787-201ENST00000611784 55 ntBASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRGV5A0A0B4J1U4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 IGHV3-19-201ENST00000521488 291 ntBASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRGV5A0A0B4J1U4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 AC010525.1-201ENST00000585559 441 ntBASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 MIR6821-201ENST00000617625 74 ntBASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRGV5A0A0B4J1U4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRGV5A0A0B4J1U4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms