Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV6-8A0A0A6YYG3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 KRT125P-201ENST00000546827 989 ntBASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV6-8A0A0A6YYG3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 PKD1P6-201ENST00000343738 4769 ntBASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-8A0A0A6YYG3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 Z92544.1-202ENST00000571933 1220 ntBASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ESRRAP2-201ENST00000418437 1549 ntBASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 AC092028.1-203ENST00000608262 953 ntBASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-8A0A0A6YYG3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 GUSBP5-202ENST00000510805 1989 ntBASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-8A0A0A6YYG3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
TRBV6-8A0A0A6YYG3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms