Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SNX5-217ENST00000606557 1087 ntBASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV30A0A087WSZ9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.46■□□□□ 0.38
TRAV30A0A087WSZ9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV30A0A087WSZ9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.46■□□□□ 0.38
TRAV30A0A087WSZ9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 AL031848.2-201ENST00000607670 837 ntBASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 KRT8P33-201ENST00000508125 1423 ntBASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 AL117328.2-201ENST00000624617 1940 ntBASIC17.45■□□□□ 0.38
TRAV30A0A087WSZ9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 AC233723.2-201ENST00000623798 2106 ntBASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV30A0A087WSZ9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 ESRRAP2-201ENST00000418437 1549 ntBASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 SLC25A24-204ENST00000569674 2357 ntBASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV30A0A087WSZ9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 MIR6722-201ENST00000617286 78 ntBASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV30A0A087WSZ9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 BX664725.1-201ENST00000438252 379 ntBASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV30A0A087WSZ9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms