Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 MIR769-201ENST00000390225 118 ntBASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 AL391647.1-201ENST00000395664 511 ntBASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 OR8T1P-201ENST00000421347 918 ntBASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 ISCA2P1-201ENST00000425548 448 ntBASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 AC099548.2-209ENST00000480264 625 ntBASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 MIR4525-201ENST00000580000 75 ntBASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.46□□□□□ -0.73
HLA-DRB4X5D2U9 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 AC015909.3-201ENST00000572855 1794 ntBASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
HLA-DRB4X5D2U9 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC010970.1-201ENST00000445125 1848 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 MARK2P9-201ENST00000430958 1727 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC009474.1-201ENST00000455096 1565 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 KRT17P5-201ENST00000332088 839 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms