Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CCND3P1-201ENST00000438347 580 ntBASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 RNA5SP420-201ENST00000516997 137 ntBASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 FBXO36P1-201ENST00000579006 471 ntBASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 RN7SL134P-201ENST00000579756 303 ntBASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 AC006116.2-201ENST00000589958 988 ntBASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 AC024075.2-201ENST00000598112 1473 ntBASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 LILRP2-202ENST00000413572 1383 ntBASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 HNRNPA3P6-201ENST00000472163 1006 ntBASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 MIR4254-201ENST00000581063 76 ntBASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 KRT18P8-201ENST00000581937 1246 ntBASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNMT3BQ9UBC3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms