Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.65□□□□□ -0.38
USB1Q9BQ65 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USB1Q9BQ65 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.65□□□□□ -0.39
USB1Q9BQ65 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.65□□□□□ -0.39
USB1Q9BQ65 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.65□□□□□ -0.39
USB1Q9BQ65 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 AL355578.1-201ENST00000607405 1328 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 AL357140.3-201ENST00000639753 1983 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 SNORA72.3-201ENST00000365074 132 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 RNU6-1176P-201ENST00000390955 107 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 PDIA3P2-201ENST00000428073 158 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 TAAR4P-201ENST00000454843 1039 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 RNU6-551P-201ENST00000516661 103 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 AC092299.1-201ENST00000632679 757 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 OR2I1P-208ENST00000641137 4948 ntBASIC12.64□□□□□ -0.39
USB1Q9BQ65 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USB1Q9BQ65 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms